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Journal Abstract Search

810 related items for PubMed ID: 14695820

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  • 2. Investigation of MM-PBSA rescoring of docking poses.
    Thompson DC, Humblet C, Joseph-McCarthy D.
    J Chem Inf Model; 2008 May; 48(5):1081-91. PubMed ID: 18465849
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  • 4. Protein flexibility in ligand docking and virtual screening to protein kinases.
    Cavasotto CN, Abagyan RA.
    J Mol Biol; 2004 Mar 12; 337(1):209-25. PubMed ID: 15001363
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  • 5. FDS: flexible ligand and receptor docking with a continuum solvent model and soft-core energy function.
    Taylor RD, Jewsbury PJ, Essex JW.
    J Comput Chem; 2003 Oct 12; 24(13):1637-56. PubMed ID: 12926007
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  • 6. The MPSim-Dock hierarchical docking algorithm: application to the eight trypsin inhibitor cocrystals.
    Cho AE, Wendel JA, Vaidehi N, Kekenes-Huskey PM, Floriano WB, Maiti PK, Goddard WA.
    J Comput Chem; 2005 Jan 15; 26(1):48-71. PubMed ID: 15529328
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  • 8. Testing a flexible-receptor docking algorithm in a model binding site.
    Wei BQ, Weaver LH, Ferrari AM, Matthews BW, Shoichet BK.
    J Mol Biol; 2004 Apr 09; 337(5):1161-82. PubMed ID: 15046985
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  • 9. Critical assessment of the automated AutoDock as a new docking tool for virtual screening.
    Park H, Lee J, Lee S.
    Proteins; 2006 Nov 15; 65(3):549-54. PubMed ID: 16988956
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  • 14. Efficient method for high-throughput virtual screening based on flexible docking: discovery of novel acetylcholinesterase inhibitors.
    Mizutani MY, Itai A.
    J Med Chem; 2004 Sep 23; 47(20):4818-28. PubMed ID: 15369385
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  • 15. Improved protein-ligand docking using GOLD.
    Verdonk ML, Cole JC, Hartshorn MJ, Murray CW, Taylor RD.
    Proteins; 2003 Sep 01; 52(4):609-23. PubMed ID: 12910460
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  • 16. EADock: docking of small molecules into protein active sites with a multiobjective evolutionary optimization.
    Grosdidier A, Zoete V, Michielin O.
    Proteins; 2007 Jun 01; 67(4):1010-25. PubMed ID: 17380512
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  • 17. Knowledge-based design of target-focused libraries using protein-ligand interaction constraints.
    Deng Z, Chuaqui C, Singh J.
    J Med Chem; 2006 Jan 26; 49(2):490-500. PubMed ID: 16420036
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  • 18. SuperStar: improved knowledge-based interaction fields for protein binding sites.
    Verdonk ML, Cole JC, Watson P, Gillet V, Willett P.
    J Mol Biol; 2001 Mar 30; 307(3):841-59. PubMed ID: 11273705
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  • 19. Ligand-induced conformational changes: improved predictions of ligand binding conformations and affinities.
    Frimurer TM, Peters GH, Iversen LF, Andersen HS, Møller NP, Olsen OH.
    Biophys J; 2003 Apr 30; 84(4):2273-81. PubMed ID: 12668436
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  • 20. Structural interaction fingerprint (SIFt): a novel method for analyzing three-dimensional protein-ligand binding interactions.
    Deng Z, Chuaqui C, Singh J.
    J Med Chem; 2004 Jan 15; 47(2):337-44. PubMed ID: 14711306
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