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Journal Abstract Search

180 related items for PubMed ID: 14705027

  • 1. Loss of translational entropy in molecular associations.
    Siebert X, Amzel LM.
    Proteins; 2004 Jan 01; 54(1):104-15. PubMed ID: 14705027
    [Abstract] [Full Text] [Related]

  • 2. Modeling protein-small molecule interactions: structure and thermodynamics of noble gases binding in a cavity in mutant phage T4 lysozyme L99A.
    Mann G, Hermans J.
    J Mol Biol; 2000 Sep 29; 302(4):979-89. PubMed ID: 10993736
    [Abstract] [Full Text] [Related]

  • 3. Absolute and relative entropies from computer simulation with applications to ligand binding.
    Carlsson J, Aqvist J.
    J Phys Chem B; 2005 Apr 07; 109(13):6448-56. PubMed ID: 16851719
    [Abstract] [Full Text] [Related]

  • 4. Calculations of solute and solvent entropies from molecular dynamics simulations.
    Carlsson J, Aqvist J.
    Phys Chem Chem Phys; 2006 Dec 14; 8(46):5385-95. PubMed ID: 17119645
    [Abstract] [Full Text] [Related]

  • 5. Pair-correlation entropy of hydrophobic hydration: decomposition into translational and orientational contributions and analysis of solute-size effects.
    Kinoshita M, Matubayasi N, Harano Y, Nakahara M.
    J Chem Phys; 2006 Jan 14; 124(2):024512. PubMed ID: 16422616
    [Abstract] [Full Text] [Related]

  • 6. Crucial importance of translational entropy of water in pressure denaturation of proteins.
    Harano Y, Kinoshita M.
    J Chem Phys; 2006 Jul 14; 125(2):24910. PubMed ID: 16848614
    [Abstract] [Full Text] [Related]

  • 7. Entropic cost of protein-ligand binding and its dependence on the entropy in solution.
    Irudayam SJ, Henchman RH.
    J Phys Chem B; 2009 Apr 30; 113(17):5871-84. PubMed ID: 19351118
    [Abstract] [Full Text] [Related]

  • 8. Loss of translational entropy in binding, folding, and catalysis.
    Amzel LM.
    Proteins; 1997 Jun 30; 28(2):144-9. PubMed ID: 9188731
    [Abstract] [Full Text] [Related]

  • 9. Calculation of the free energy of polarization: quantifying the effect of explicitly treating electronic polarization on the transferability of force-field parameters.
    Geerke DP, van Gunsteren WF.
    J Phys Chem B; 2007 Jun 14; 111(23):6425-36. PubMed ID: 17508737
    [Abstract] [Full Text] [Related]

  • 10. An evaluation of implicit and explicit solvent model systems for the molecular dynamics simulation of bacteriophage T4 lysozyme.
    Arnold GE, Ornstein RL.
    Proteins; 1994 Jan 14; 18(1):19-33. PubMed ID: 8146120
    [Abstract] [Full Text] [Related]

  • 11. Molecular mechanism of pressure denaturation of proteins.
    Harano Y, Yoshidome T, Kinoshita M.
    J Chem Phys; 2008 Oct 14; 129(14):145103. PubMed ID: 19045168
    [Abstract] [Full Text] [Related]

  • 12. Estimation of absolute solvent and solvation shell entropies via permutation reduction.
    Reinhard F, Grubmüller H.
    J Chem Phys; 2007 Jan 07; 126(1):014102. PubMed ID: 17212485
    [Abstract] [Full Text] [Related]

  • 13. Environmental swap energy and role of configurational entropy in transfer of small molecules from water into alkanes.
    Smejtek P, Word RC.
    J Chem Phys; 2004 Jan 15; 120(3):1383-94. PubMed ID: 15268264
    [Abstract] [Full Text] [Related]

  • 14. Cancer-related mutations in BRCA1-BRCT cause long-range structural changes in protein-protein binding sites: a molecular dynamics study.
    Gough CA, Gojobori T, Imanishi T.
    Proteins; 2007 Jan 01; 66(1):69-86. PubMed ID: 17063491
    [Abstract] [Full Text] [Related]

  • 15. On the molecular origins of volumetric data.
    Chalikian TV.
    J Phys Chem B; 2008 Jan 24; 112(3):911-7. PubMed ID: 18171052
    [Abstract] [Full Text] [Related]

  • 16. AGBNP: an analytic implicit solvent model suitable for molecular dynamics simulations and high-resolution modeling.
    Gallicchio E, Levy RM.
    J Comput Chem; 2004 Mar 24; 25(4):479-99. PubMed ID: 14735568
    [Abstract] [Full Text] [Related]

  • 17. The contribution of vibrational entropy to molecular association. The dimerization of insulin.
    Tidor B, Karplus M.
    J Mol Biol; 1994 May 06; 238(3):405-14. PubMed ID: 8176732
    [Abstract] [Full Text] [Related]

  • 18. Integral equation study of hydrophobic interaction: a comparison between the simple point charge model for water and a Lennard-Jones model for solvent.
    Sumi T, Sekino H.
    J Chem Phys; 2007 Apr 14; 126(14):144508. PubMed ID: 17444724
    [Abstract] [Full Text] [Related]

  • 19. Flexibility and conformational entropy in protein-protein binding.
    Grünberg R, Nilges M, Leckner J.
    Structure; 2006 Apr 14; 14(4):683-93. PubMed ID: 16615910
    [Abstract] [Full Text] [Related]

  • 20. Phenol-benzene complexation dynamics: quantum chemistry calculation, molecular dynamics simulations, and two dimensional IR spectroscopy.
    Kwac K, Lee C, Jung Y, Han J, Kwak K, Zheng J, Fayer MD, Cho M.
    J Chem Phys; 2006 Dec 28; 125(24):244508. PubMed ID: 17199356
    [Abstract] [Full Text] [Related]

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