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Journal Abstract Search

79 related items for PubMed ID: 14708127

  • 1. Theoretical and computational studies of the glucose signaling pathways in yeast using global gene expression data.
    Lin X, Floudas CA, Wang Y, Broach JR.
    Biotechnol Bioeng; 2003 Dec 30; 84(7):864-86. PubMed ID: 14708127
    [Abstract] [Full Text] [Related]

  • 2. Detecting biological associations between genes based on the theory of phase synchronization.
    Kim CS, Riikonen P, Salakoski T.
    Biosystems; 2008 May 30; 92(2):99-113. PubMed ID: 18289772
    [Abstract] [Full Text] [Related]

  • 3. Fast network component analysis (FastNCA) for gene regulatory network reconstruction from microarray data.
    Chang C, Ding Z, Hung YS, Fung PC.
    Bioinformatics; 2008 Jun 01; 24(11):1349-58. PubMed ID: 18400771
    [Abstract] [Full Text] [Related]

  • 4. A Gibbs sampler for the identification of gene expression and network connectivity consistency.
    Brynildsen MP, Tran LM, Liao JC.
    Bioinformatics; 2006 Dec 15; 22(24):3040-6. PubMed ID: 17060361
    [Abstract] [Full Text] [Related]

  • 5. A control study to evaluate a computer-based microarray experiment design recommendation system for gene-regulation pathways discovery.
    Yoo C, Cooper GF, Schmidt M.
    J Biomed Inform; 2006 Apr 15; 39(2):126-46. PubMed ID: 16203178
    [Abstract] [Full Text] [Related]

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  • 8. Pathway recognition and augmentation by computational analysis of microarray expression data.
    Novak BA, Jain AN.
    Bioinformatics; 2006 Jan 15; 22(2):233-41. PubMed ID: 16278238
    [Abstract] [Full Text] [Related]

  • 9. Reconstructing biological networks using conditional correlation analysis.
    Rice JJ, Tu Y, Stolovitzky G.
    Bioinformatics; 2005 Mar 15; 21(6):765-73. PubMed ID: 15486043
    [Abstract] [Full Text] [Related]

  • 10. Ranking genes by their co-expression to subsets of pathway members.
    Adler P, Peterson H, Agius P, Reimand J, Vilo J.
    Ann N Y Acad Sci; 2009 Mar 15; 1158():1-13. PubMed ID: 19348627
    [Abstract] [Full Text] [Related]

  • 11. Alternative pathway approach for automating analysis and validation of cell perturbation networks and design of perturbation experiments.
    Gong Y, Zhang Z.
    Ann N Y Acad Sci; 2007 Dec 15; 1115():267-85. PubMed ID: 17925355
    [Abstract] [Full Text] [Related]

  • 12. SPINE: a framework for signaling-regulatory pathway inference from cause-effect experiments.
    Ourfali O, Shlomi T, Ideker T, Ruppin E, Sharan R.
    Bioinformatics; 2007 Jul 01; 23(13):i359-66. PubMed ID: 17646318
    [Abstract] [Full Text] [Related]

  • 13. Understanding signaling in yeast: Insights from network analysis.
    Arga KY, Onsan ZI, Kirdar B, Ulgen KO, Nielsen J.
    Biotechnol Bioeng; 2007 Aug 01; 97(5):1246-58. PubMed ID: 17252576
    [Abstract] [Full Text] [Related]

  • 14. Increasing feasibility of optimal gene network estimation.
    Hansen A, Ott S, Koentges G.
    Genome Inform; 2004 Aug 01; 15(2):141-50. PubMed ID: 15706500
    [Abstract] [Full Text] [Related]

  • 15. Prediction of regulatory pathways using mRNA expression and protein interaction data: application to identification of galactose regulatory pathway.
    Darvish A, Najarian K.
    Biosystems; 2006 Aug 01; 83(2-3):125-35. PubMed ID: 16384635
    [Abstract] [Full Text] [Related]

  • 16. A systems biology approach to study glucose repression in the yeast Saccharomyces cerevisiae.
    Westergaard SL, Oliveira AP, Bro C, Olsson L, Nielsen J.
    Biotechnol Bioeng; 2007 Jan 01; 96(1):134-45. PubMed ID: 16878332
    [Abstract] [Full Text] [Related]

  • 17. Computational inference of replication and transcription activator regulator activity in herpesvirus from gene expression data.
    Recchia A, Wit E, Vinciotti V, Kellam P.
    IET Syst Biol; 2008 Nov 01; 2(6):385-96. PubMed ID: 19045834
    [Abstract] [Full Text] [Related]

  • 18. Inferring gene regulatory networks from multiple microarray datasets.
    Wang Y, Joshi T, Zhang XS, Xu D, Chen L.
    Bioinformatics; 2006 Oct 01; 22(19):2413-20. PubMed ID: 16864593
    [Abstract] [Full Text] [Related]

  • 19. Steady state approach to model gene regulatory networks--simulation of microarray experiments.
    Rawool SB, Venkatesh KV.
    Biosystems; 2007 Oct 01; 90(3):636-55. PubMed ID: 17382459
    [Abstract] [Full Text] [Related]

  • 20. Advances to Bayesian network inference for generating causal networks from observational biological data.
    Yu J, Smith VA, Wang PP, Hartemink AJ, Jarvis ED.
    Bioinformatics; 2004 Dec 12; 20(18):3594-603. PubMed ID: 15284094
    [Abstract] [Full Text] [Related]

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