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130 related items for PubMed ID: 15063646
21. Self-organization in protein folding and the hydrophobic interaction. Gerstman BS, Chapagain PP. J Chem Phys; 2005 Aug 01; 123(5):054901. PubMed ID: 16108687 [Abstract] [Full Text] [Related]
22. Navigation and analysis of the energy landscape of small proteins using the activation-relaxation technique. Mousseau N, Derreumaux P, Gilbert G. Phys Biol; 2005 Nov 09; 2(4):S101-7. PubMed ID: 16280615 [Abstract] [Full Text] [Related]
24. Backbone and side-chain ordering in a small protein. Wei Y, Nadler W, Hansmann UH. J Chem Phys; 2008 Jan 14; 128(2):025105. PubMed ID: 18205480 [Abstract] [Full Text] [Related]
25. Ab initio discrete molecular dynamics approach to protein folding and aggregation. Urbanc B, Borreguero JM, Cruz L, Stanley HE. Methods Enzymol; 2006 Jan 14; 412():314-38. PubMed ID: 17046666 [Abstract] [Full Text] [Related]
27. Characterization of the residual structure in the unfolded state of the Delta131Delta fragment of staphylococcal nuclease. Francis CJ, Lindorff-Larsen K, Best RB, Vendruscolo M. Proteins; 2006 Oct 01; 65(1):145-52. PubMed ID: 16862593 [Abstract] [Full Text] [Related]
28. Characterization of protein-folding pathways by reduced-space modeling. Kmiecik S, Kolinski A. Proc Natl Acad Sci U S A; 2007 Jul 24; 104(30):12330-5. PubMed ID: 17636132 [Abstract] [Full Text] [Related]
33. Pathways to a protein folding intermediate observed in a 1-microsecond simulation in aqueous solution. Duan Y, Kollman PA. Science; 1998 Oct 23; 282(5389):740-4. PubMed ID: 9784131 [Abstract] [Full Text] [Related]
34. Folding simulations of small proteins. Kim SY, Lee J, Lee J. Biophys Chem; 2005 Apr 01; 115(2-3):195-200. PubMed ID: 15752604 [Abstract] [Full Text] [Related]
35. Protein conformational transitions coupled to binding in molecular recognition of unstructured proteins: deciphering the effect of intermolecular interactions on computational structure prediction of the p27Kip1 protein bound to the cyclin A-cyclin-dependent kinase 2 complex. Verkhivker GM. Proteins; 2005 Feb 15; 58(3):706-16. PubMed ID: 15609350 [Abstract] [Full Text] [Related]
36. Side-chain entropy effects on protein secondary structure formation. Chellgren BW, Creamer TP. Proteins; 2006 Feb 01; 62(2):411-20. PubMed ID: 16315271 [Abstract] [Full Text] [Related]
38. Protein modeling with reduced representation: statistical potentials and protein folding mechanism. Ekonomiuk D, Kielbasinski M, Kolinski A. Acta Biochim Pol; 2005 Feb 01; 52(4):741-8. PubMed ID: 15933762 [Abstract] [Full Text] [Related]
39. The mechanical unfolding of ubiquitin through all-atom Monte Carlo simulation with a Go-type potential. Kleiner A, Shakhnovich E. Biophys J; 2007 Mar 15; 92(6):2054-61. PubMed ID: 17293405 [Abstract] [Full Text] [Related]
40. A shorter peptide model from staphylococcal nuclease for the folding-unfolding equilibrium of a beta-hairpin shows that unfolded state has significant contribution from compact conformational states. Patel S, Sasidhar YU. J Struct Biol; 2008 Oct 15; 164(1):60-74. PubMed ID: 18602478 [Abstract] [Full Text] [Related] Page: [Previous] [Next] [New Search]