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304 related items for PubMed ID: 15099748

  • 1. Thermodynamics and kinetics of non-native interactions in protein folding: a single point mutant significantly stabilizes the N-terminal domain of L9 by modulating non-native interactions in the denatured state.
    Cho JH, Sato S, Raleigh DP.
    J Mol Biol; 2004 May 07; 338(4):827-37. PubMed ID: 15099748
    [Abstract] [Full Text] [Related]

  • 2. Electrostatic interactions in the denatured state and in the transition state for protein folding: effects of denatured state interactions on the analysis of transition state structure.
    Cho JH, Raleigh DP.
    J Mol Biol; 2006 Jun 23; 359(5):1437-46. PubMed ID: 16787780
    [Abstract] [Full Text] [Related]

  • 3. Mutational analysis demonstrates that specific electrostatic interactions can play a key role in the denatured state ensemble of proteins.
    Cho JH, Raleigh DP.
    J Mol Biol; 2005 Oct 14; 353(1):174-85. PubMed ID: 16165156
    [Abstract] [Full Text] [Related]

  • 4. Analysis of the pH-dependent folding and stability of histidine point mutants allows characterization of the denatured state and transition state for protein folding.
    Horng JC, Cho JH, Raleigh DP.
    J Mol Biol; 2005 Jan 07; 345(1):163-73. PubMed ID: 15567419
    [Abstract] [Full Text] [Related]

  • 5. pKa values and the pH dependent stability of the N-terminal domain of L9 as probes of electrostatic interactions in the denatured state. Differentiation between local and nonlocal interactions.
    Kuhlman B, Luisi DL, Young P, Raleigh DP.
    Biochemistry; 1999 Apr 13; 38(15):4896-903. PubMed ID: 10200179
    [Abstract] [Full Text] [Related]

  • 6. pH-dependent interactions and the stability and folding kinetics of the N-terminal domain of L9. Electrostatic interactions are only weakly formed in the transition state for folding.
    Luisi DL, Raleigh DP.
    J Mol Biol; 2000 Jun 16; 299(4):1091-100. PubMed ID: 10843860
    [Abstract] [Full Text] [Related]

  • 7. pH-dependent stability and folding kinetics of a protein with an unusual alpha-beta topology: the C-terminal domain of the ribosomal protein L9.
    Sato S, Raleigh DP.
    J Mol Biol; 2002 Apr 26; 318(2):571-82. PubMed ID: 12051860
    [Abstract] [Full Text] [Related]

  • 8. The unfolded state of NTL9 is compact in the absence of denaturant.
    Anil B, Li Y, Cho JH, Raleigh DP.
    Biochemistry; 2006 Aug 22; 45(33):10110-6. PubMed ID: 16906769
    [Abstract] [Full Text] [Related]

  • 9. Analysis of electrostatic interactions in the denatured state ensemble of the N-terminal domain of L9 under native conditions.
    Meng W, Raleigh DP.
    Proteins; 2011 Dec 22; 79(12):3500-10. PubMed ID: 21915914
    [Abstract] [Full Text] [Related]

  • 10. Mutational analysis of the folding transition state of the C-terminal domain of ribosomal protein L9: a protein with an unusual beta-sheet topology.
    Li Y, Gupta R, Cho JH, Raleigh DP.
    Biochemistry; 2007 Jan 30; 46(4):1013-21. PubMed ID: 17240985
    [Abstract] [Full Text] [Related]

  • 11. Conformational plasticity in folding of the split beta-alpha-beta protein S6: evidence for burst-phase disruption of the native state.
    Otzen DE, Oliveberg M.
    J Mol Biol; 2002 Apr 05; 317(4):613-27. PubMed ID: 11955013
    [Abstract] [Full Text] [Related]

  • 12. Kinetic analysis of molecular dynamics simulations reveals changes in the denatured state and switch of folding pathways upon single-point mutation of a beta-sheet miniprotein.
    Muff S, Caflisch A.
    Proteins; 2008 Mar 05; 70(4):1185-95. PubMed ID: 17847092
    [Abstract] [Full Text] [Related]

  • 13. Nonnative electrostatic interactions can modulate protein folding: molecular dynamics with a grain of salt.
    Azia A, Levy Y.
    J Mol Biol; 2009 Oct 23; 393(2):527-42. PubMed ID: 19683007
    [Abstract] [Full Text] [Related]

  • 14. Perturbations of the denatured state ensemble: modeling their effects on protein stability and folding kinetics.
    Wrabl JO, Shortle D.
    Protein Sci; 1996 Nov 23; 5(11):2343-52. PubMed ID: 8931153
    [Abstract] [Full Text] [Related]

  • 15. Thermodynamics of protein denatured states.
    Bowler BE.
    Mol Biosyst; 2007 Feb 23; 3(2):88-99. PubMed ID: 17245488
    [Abstract] [Full Text] [Related]

  • 16. Surface salt bridges, double-mutant cycles, and protein stability: an experimental and computational analysis of the interaction of the Asp 23 side chain with the N-terminus of the N-terminal domain of the ribosomal protein l9.
    Luisi DL, Snow CD, Lin JJ, Hendsch ZS, Tidor B, Raleigh DP.
    Biochemistry; 2003 Jun 17; 42(23):7050-60. PubMed ID: 12795600
    [Abstract] [Full Text] [Related]

  • 17. Antagonism, non-native interactions and non-two-state folding in S6 revealed by double-mutant cycle analysis.
    Otzen D.
    Protein Eng Des Sel; 2005 Nov 17; 18(11):547-57. PubMed ID: 16230299
    [Abstract] [Full Text] [Related]

  • 18. Non-native local interactions in protein folding and stability: introducing a helical tendency in the all beta-sheet alpha-spectrin SH3 domain.
    Prieto J, Wilmans M, Jiménez MA, Rico M, Serrano L.
    J Mol Biol; 1997 May 16; 268(4):760-78. PubMed ID: 9175859
    [Abstract] [Full Text] [Related]

  • 19. On the relationship between protein stability and folding kinetics: a comparative study of the N-terminal domains of RNase HI, E. coli and Bacillus stearothermophilus L9.
    Sato S, Xiang S, Raleigh DP.
    J Mol Biol; 2001 Sep 21; 312(3):569-77. PubMed ID: 11563917
    [Abstract] [Full Text] [Related]

  • 20. The denatured state ensemble contains significant local and long-range structure under native conditions: analysis of the N-terminal domain of ribosomal protein L9.
    Meng W, Luan B, Lyle N, Pappu RV, Raleigh DP.
    Biochemistry; 2013 Apr 16; 52(15):2662-71. PubMed ID: 23480024
    [Abstract] [Full Text] [Related]

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