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130 related items for PubMed ID: 15115180

  • 1. Sequence-altered peptide adopts optimum conformation for modification-dependent binding of the yeast tRNAPhe anticodon domain.
    Mucha P, Szyk A, Rekowski P, Agris PF.
    Protein J; 2004 Jan; 23(1):33-8. PubMed ID: 15115180
    [Abstract] [Full Text] [Related]

  • 2. Anticodon domain methylated nucleosides of yeast tRNA(Phe) are significant recognition determinants in the binding of a phage display selected peptide.
    Mucha P, Szyk A, Rekowski P, Weiss PA, Agris PF.
    Biochemistry; 2001 Nov 27; 40(47):14191-9. PubMed ID: 11714272
    [Abstract] [Full Text] [Related]

  • 3. Interaction of RNA with phage display selected peptides analyzed by capillary electrophoresis mobility shift assay.
    Mucha P, Szyk A, Rekowski P, Guenther R, Agris PF.
    RNA; 2002 May 27; 8(5):698-704. PubMed ID: 12022235
    [Abstract] [Full Text] [Related]

  • 4. The uridine in "U-turn": contributions to tRNA-ribosomal binding.
    Ashraf SS, Ansari G, Guenther R, Sochacka E, Malkiewicz A, Agris PF.
    RNA; 1999 Apr 27; 5(4):503-11. PubMed ID: 10199567
    [Abstract] [Full Text] [Related]

  • 5. A distinctive RNA fold: the solution structure of an analogue of the yeast tRNAPhe T Psi C domain.
    Koshlap KM, Guenther R, Sochacka E, Malkiewicz A, Agris PF.
    Biochemistry; 1999 Jul 06; 38(27):8647-56. PubMed ID: 10393540
    [Abstract] [Full Text] [Related]

  • 6. A magnesium-induced conformational transition in the loop of a DNA analog of the yeast tRNA(Phe) anticodon is dependent on RNA-like modifications of the bases of the stem.
    Guenther RH, Hardin CC, Sierzputowska-Gracz H, Dao V, Agris PF.
    Biochemistry; 1992 Nov 17; 31(45):11004-11. PubMed ID: 1445838
    [Abstract] [Full Text] [Related]

  • 7. Experimental models of protein-RNA interaction: isolation and analyses of tRNA(Phe) and U1 snRNA-binding peptides from bacteriophage display libraries.
    Agris PF, Marchbank MT, Newman W, Guenther R, Ingram P, Swallow J, Mucha P, Szyk A, Rekowski P, Peletskaya E, Deutscher SL.
    J Protein Chem; 1999 May 17; 18(4):425-35. PubMed ID: 10449040
    [Abstract] [Full Text] [Related]

  • 8. Molecular dynamics of the anticodon domain of yeast tRNA(Phe): codon-anticodon interaction.
    Lahiri A, Nilsson L.
    Biophys J; 2000 Nov 17; 79(5):2276-89. PubMed ID: 11053108
    [Abstract] [Full Text] [Related]

  • 9. 5-Methylcytidine is required for cooperative binding of Mg2+ and a conformational transition at the anticodon stem-loop of yeast phenylalanine tRNA.
    Chen Y, Sierzputowska-Gracz H, Guenther R, Everett K, Agris PF.
    Biochemistry; 1993 Sep 28; 32(38):10249-53. PubMed ID: 8399153
    [Abstract] [Full Text] [Related]

  • 10. Synthesis and properties of uniquely modified oligoribonucleotides: yeast tRNA(Phe) fragments with 6-methyluridine and 5,6-dimethyluridine at site-specific positions.
    Sochacka E, Czerwinska G, Guenther R, Cain R, Agris PF, Malkiewicz A.
    Nucleosides Nucleotides Nucleic Acids; 2000 Mar 28; 19(3):515-31. PubMed ID: 10843489
    [Abstract] [Full Text] [Related]

  • 11. Replacement of RNA hairpins by in vitro selected tetranucleotides.
    Dichtl B, Pan T, DiRenzo AB, Uhlenbeck OC.
    Nucleic Acids Res; 1993 Feb 11; 21(3):531-5. PubMed ID: 7680121
    [Abstract] [Full Text] [Related]

  • 12. Metal ion stabilization of the U-turn of the A37 N6-dimethylallyl-modified anticodon stem-loop of Escherichia coli tRNAPhe.
    Cabello-Villegas J, Tworowska I, Nikonowicz EP.
    Biochemistry; 2004 Jan 13; 43(1):55-66. PubMed ID: 14705931
    [Abstract] [Full Text] [Related]

  • 13. Hypermodified nucleosides in the anticodon of tRNALys stabilize a canonical U-turn structure.
    Sundaram M, Durant PC, Davis DR.
    Biochemistry; 2000 Oct 17; 39(41):12575-84. PubMed ID: 11027137
    [Abstract] [Full Text] [Related]

  • 14. Determination of the angle between the anticodon and aminoacyl acceptor stems of yeast phenylalanyl tRNA in solution.
    Friederich MW, Gast FU, Vacano E, Hagerman PJ.
    Proc Natl Acad Sci U S A; 1995 May 23; 92(11):4803-7. PubMed ID: 7761403
    [Abstract] [Full Text] [Related]

  • 15. Pleiotropic effects of intron removal on base modification pattern of yeast tRNAPhe: an in vitro study.
    Jiang HQ, Motorin Y, Jin YX, Grosjean H.
    Nucleic Acids Res; 1997 Jul 15; 25(14):2694-701. PubMed ID: 9207014
    [Abstract] [Full Text] [Related]

  • 16. Role of the constant uridine in binding of yeast tRNAPhe anticodon arm to 30S ribosomes.
    Uhlenbeck OC, Lowary PT, Wittenberg WL.
    Nucleic Acids Res; 1982 Jun 11; 10(11):3341-52. PubMed ID: 7048255
    [Abstract] [Full Text] [Related]

  • 17. Naturally-occurring modification restricts the anticodon domain conformational space of tRNA(Phe).
    Stuart JW, Koshlap KM, Guenther R, Agris PF.
    J Mol Biol; 2003 Dec 12; 334(5):901-18. PubMed ID: 14643656
    [Abstract] [Full Text] [Related]

  • 18. Solution conformations of unmodified and A(37)N(6)-dimethylallyl modified anticodon stem-loops of Escherichia coli tRNA(Phe).
    Cabello-Villegas J, Winkler ME, Nikonowicz EP.
    J Mol Biol; 2002 Jun 21; 319(5):1015-34. PubMed ID: 12079344
    [Abstract] [Full Text] [Related]

  • 19. Photochemical cross-linking of the anticodon loop of yeast tRNA(Phe) to 30S-subunit protein S7 at the ribosomal A and P sites.
    Sylvers LA, Kopylov AM, Wower J, Hixson SS, Zimmermann RA.
    Biochimie; 1992 Apr 21; 74(4):381-9. PubMed ID: 1637863
    [Abstract] [Full Text] [Related]

  • 20. The crystal structure of phenylalanyl-tRNA synthetase from thermus thermophilus complexed with cognate tRNAPhe.
    Goldgur Y, Mosyak L, Reshetnikova L, Ankilova V, Lavrik O, Khodyreva S, Safro M.
    Structure; 1997 Jan 15; 5(1):59-68. PubMed ID: 9016717
    [Abstract] [Full Text] [Related]

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