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Journal Abstract Search

241 related items for PubMed ID: 15165859

  • 21. Conformational analysis of the 20-residue membrane-bound portion of melittin by conformational space annealing.
    Lee J, Scheraga HA, Rackovsky S.
    Biopolymers; 1998 Aug; 46(2):103-16. PubMed ID: 9664844
    [Abstract] [Full Text] [Related]

  • 22. Coupling between folding and ionization equilibria: effects of pH on the conformational preferences of polypeptides.
    Ripoll DR, Vorobjev YN, Liwo A, Vila JA, Scheraga HA.
    J Mol Biol; 1996 Dec 13; 264(4):770-83. PubMed ID: 8980685
    [Abstract] [Full Text] [Related]

  • 23. Efficient high level expression of peptides and proteins as fusion proteins with the N-terminal domain of L9: application to the villin headpiece helical subdomain.
    Bi Y, Tang Y, Raleigh DP, Cho JH.
    Protein Expr Purif; 2006 May 13; 47(1):234-40. PubMed ID: 16325421
    [Abstract] [Full Text] [Related]

  • 24. Empirical solvation models in the context of conformational energy searches: application to bovine pancreatic trypsin inhibitor.
    Williams RL, Vila J, Perrot G, Scheraga HA.
    Proteins; 1992 Sep 13; 14(1):110-9. PubMed ID: 1384032
    [Abstract] [Full Text] [Related]

  • 25. Polypeptide folding using Monte Carlo sampling, concerted rotation, and continuum solvation.
    Ulmschneider JP, Jorgensen WL.
    J Am Chem Soc; 2004 Feb 18; 126(6):1849-57. PubMed ID: 14871118
    [Abstract] [Full Text] [Related]

  • 26. Crystal structure of a pH-stabilized mutant of villin headpiece.
    Meng J, McKnight CJ.
    Biochemistry; 2008 Apr 22; 47(16):4644-50. PubMed ID: 18370407
    [Abstract] [Full Text] [Related]

  • 27. Conformational analysis of endothelin-1: effects of solvation free energy.
    Hempel JC, Fine RM, Hassan M, Ghoul W, Guaragna A, Koerber SC, Li Z, Hagler AT.
    Biopolymers; 1995 Sep 22; 36(3):283-301. PubMed ID: 7669916
    [Abstract] [Full Text] [Related]

  • 28. A new force field (ECEPP-05) for peptides, proteins, and organic molecules.
    Arnautova YA, Jagielska A, Scheraga HA.
    J Phys Chem B; 2006 Mar 16; 110(10):5025-44. PubMed ID: 16526746
    [Abstract] [Full Text] [Related]

  • 29. Global optimization and folding pathways of selected alpha-helical proteins.
    Carr JM, Wales DJ.
    J Chem Phys; 2005 Dec 15; 123(23):234901. PubMed ID: 16392943
    [Abstract] [Full Text] [Related]

  • 30. Empirical solvation models can be used to differentiate native from near-native conformations of bovine pancreatic trypsin inhibitor.
    Vila J, Williams RL, Vásquez M, Scheraga HA.
    Proteins; 1991 Dec 15; 10(3):199-218. PubMed ID: 1715564
    [Abstract] [Full Text] [Related]

  • 31. Coupling between conformation and proton binding in proteins.
    Vila JA, Ripoll DR, Arnautova YA, Vorobjev YN, Scheraga HA.
    Proteins; 2005 Oct 01; 61(1):56-68. PubMed ID: 16080152
    [Abstract] [Full Text] [Related]

  • 32. Increased rigidity of eglin c at acidic pH: evidence from NMR spin relaxation and MD simulations.
    Hu H, Clarkson MW, Hermans J, Lee AL.
    Biochemistry; 2003 Dec 02; 42(47):13856-68. PubMed ID: 14636053
    [Abstract] [Full Text] [Related]

  • 33. New developments of the electrostatically driven Monte Carlo method: test on the membrane-bound portion of melittin.
    Ripoll DR, Liwo A, Scheraga HA.
    Biopolymers; 1998 Aug 02; 46(2):117-26. PubMed ID: 9664845
    [Abstract] [Full Text] [Related]

  • 34. Determination of conformational equilibrium of peptides in solution by NMR spectroscopy and theoretical conformational analysis: application to the calibration of mean-field solvation models.
    Groth M, Malicka J, Rodziewicz- Motowidło S, Czaplewski C, Klaudel L, Wiczk W, Liwo A.
    Biopolymers; 2001 Aug 02; 60(2):79-95. PubMed ID: 11455544
    [Abstract] [Full Text] [Related]

  • 35. Necessary conditions for avoiding incorrect polypeptide folds in conformational search by energy minimization.
    Vajda S, Jafri MS, Sezerman OU, DeLisi C.
    Biopolymers; 1993 Jan 02; 33(1):173-92. PubMed ID: 8427934
    [Abstract] [Full Text] [Related]

  • 36. Application of the diffusion-collision model to the folding of three-helix bundle proteins.
    Islam SA, Karplus M, Weaver DL.
    J Mol Biol; 2002 Apr 19; 318(1):199-215. PubMed ID: 12054779
    [Abstract] [Full Text] [Related]

  • 37. Predicting the effect of a point mutation on a protein fold: the villin and advillin headpieces and their Pro62Ala mutants.
    Piana S, Laio A, Marinelli F, Van Troys M, Bourry D, Ampe C, Martins JC.
    J Mol Biol; 2008 Jan 11; 375(2):460-70. PubMed ID: 18022635
    [Abstract] [Full Text] [Related]

  • 38. Refinement of the thrombin-bound structure of a hirudin peptide by a restrained electrostatically driven Monte Carlo method.
    Ripoll DR, Ni F.
    Biopolymers; 1992 Apr 11; 32(4):359-65. PubMed ID: 1623131
    [Abstract] [Full Text] [Related]

  • 39. Ab initio structure prediction for small polypeptides and protein fragments using genetic algorithms.
    Pedersen JT, Moult J.
    Proteins; 1995 Nov 11; 23(3):454-60. PubMed ID: 8710838
    [Abstract] [Full Text] [Related]

  • 40. Thermodynamics of a reverse turn motif. Solvent effects and side-chain packing.
    Demchuk E, Bashford D, Gippert GP, Case DA.
    J Mol Biol; 1997 Jul 11; 270(2):305-17. PubMed ID: 9236131
    [Abstract] [Full Text] [Related]

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