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Journal Abstract Search

816 related items for PubMed ID: 15215462

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  • 3. Visualizing and quantifying molecular goodness-of-fit: small-probe contact dots with explicit hydrogen atoms.
    Word JM, Lovell SC, LaBean TH, Taylor HC, Zalis ME, Presley BK, Richardson JS, Richardson DC.
    J Mol Biol; 1999 Jan 29; 285(4):1711-33. PubMed ID: 9917407
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  • 4. WebFEATURE: An interactive web tool for identifying and visualizing functional sites on macromolecular structures.
    Liang MP, Banatao DR, Klein TE, Brutlag DL, Altman RB.
    Nucleic Acids Res; 2003 Jul 01; 31(13):3324-7. PubMed ID: 12824318
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  • 6. MolProbity for the masses-of data.
    Chen VB, Wedell JR, Wenger RK, Ulrich EL, Markley JL.
    J Biomol NMR; 2015 Sep 01; 63(1):77-83. PubMed ID: 26195077
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  • 11. SEM (Symmetry Equivalent Molecules): A web-based GUI to generate and visualize the macromolecules.
    Hussain AS, Kumar ChK, Rajesh CK, Sheik SS, Sekar K.
    Nucleic Acids Res; 2003 Jul 01; 31(13):3356-8. PubMed ID: 12824326
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  • 12. Structure validation by Calpha geometry: phi,psi and Cbeta deviation.
    Lovell SC, Davis IW, Arendall WB, de Bakker PI, Word JM, Prisant MG, Richardson JS, Richardson DC.
    Proteins; 2003 Feb 15; 50(3):437-50. PubMed ID: 12557186
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  • 13. PDB explorer -- a web based algorithm for protein annotation viewer and 3D visualization.
    Nayarisseri A, Shardiwal RK, Yadav M, Kanungo N, Singh P, Shah P, Ahmed S.
    Interdiscip Sci; 2014 Dec 15; 6(4):279-84. PubMed ID: 25118648
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  • 14. RNABC: forward kinematics to reduce all-atom steric clashes in RNA backbone.
    Wang X, Kapral G, Murray L, Richardson D, Richardson J, Snoeyink J.
    J Math Biol; 2008 Jan 15; 56(1-2):253-78. PubMed ID: 17401565
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  • 15. POPS: A fast algorithm for solvent accessible surface areas at atomic and residue level.
    Cavallo L, Kleinjung J, Fraternali F.
    Nucleic Acids Res; 2003 Jul 01; 31(13):3364-6. PubMed ID: 12824328
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  • 16. An approach to creating a more realistic working model from a protein data bank entry.
    Brandon CJ, Martin BP, McGee KJ, Stewart JJ, Braun-Sand SB.
    J Mol Model; 2015 Jan 01; 21(1):3. PubMed ID: 25605595
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  • 17. Identification of tunnels in proteins, nucleic acids, inorganic materials and molecular ensembles.
    Damborský J, Petrek M, Banás P, Otyepka M.
    Biotechnol J; 2007 Jan 01; 2(1):62-7. PubMed ID: 17183511
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  • 18. iMolTalk: an interactive, internet-based protein structure analysis server.
    Diemand AV, Scheib H.
    Nucleic Acids Res; 2004 Jul 01; 32(Web Server issue):W512-6. PubMed ID: 15215439
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  • 19. NALDB: nucleic acid ligand database for small molecules targeting nucleic acid.
    Kumar Mishra S, Kumar A.
    Database (Oxford); 2016 Jul 01; 2016():. PubMed ID: 26896846
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  • 20. Design and implementation of a collaborative molecular graphics environment.
    Tate JG, Moreland JL, Bourne PE.
    J Mol Graph Model; 2001 Jul 01; 19(3-4):280-7, 369-73. PubMed ID: 11449565
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