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162 related items for PubMed ID: 15306461

  • 1. Nonlinear breathing modes due to a defect in a DNA chain.
    Wattis JA.
    Philos Trans A Math Phys Eng Sci; 2004 Jul 15; 362(1820):1461-77. PubMed ID: 15306461
    [Abstract] [Full Text] [Related]

  • 2. Nonlinear breathing modes at a defect site in DNA.
    Duduială CI, Wattis JA, Dryden IL, Laughton CA.
    Phys Rev E Stat Nonlin Soft Matter Phys; 2009 Dec 15; 80(6 Pt 1):061906. PubMed ID: 20365189
    [Abstract] [Full Text] [Related]

  • 3. Atomistic view of base flipping in DNA.
    Huang N, MacKerell AD.
    Philos Trans A Math Phys Eng Sci; 2004 Jul 15; 362(1820):1439-60. PubMed ID: 15306460
    [Abstract] [Full Text] [Related]

  • 4. Symmetric equilibria of a thin elastic rod with self-contacts.
    Starostin EL.
    Philos Trans A Math Phys Eng Sci; 2004 Jul 15; 362(1820):1317-34. PubMed ID: 15306453
    [Abstract] [Full Text] [Related]

  • 5. An introduction to the mechanics of DNA.
    Travers AA, Thompson JM.
    Philos Trans A Math Phys Eng Sci; 2004 Jul 15; 362(1820):1265-79. PubMed ID: 15306450
    [Abstract] [Full Text] [Related]

  • 6. Deformations of promoter DNA bound to carcinogens help interpret effects on TATA-element structure and activity.
    Zhang Q, Broyde S, Schlick T.
    Philos Trans A Math Phys Eng Sci; 2004 Jul 15; 362(1820):1479-96. PubMed ID: 15306462
    [Abstract] [Full Text] [Related]

  • 7. Methods for determining stability in continuum elastic-rod models of DNA.
    Hoffman KA.
    Philos Trans A Math Phys Eng Sci; 2004 Jul 15; 362(1820):1301-15. PubMed ID: 15306452
    [Abstract] [Full Text] [Related]

  • 8. Implications of the dependence of the elastic properties of DNA on nucleotide sequence.
    Olson WK, Swigon D, Coleman BD.
    Philos Trans A Math Phys Eng Sci; 2004 Jul 15; 362(1820):1403-22. PubMed ID: 15306458
    [Abstract] [Full Text] [Related]

  • 9. Statics and dynamics of condensed DNA within phages and globules.
    Odijk T.
    Philos Trans A Math Phys Eng Sci; 2004 Jul 15; 362(1820):1497-517. PubMed ID: 15306463
    [Abstract] [Full Text] [Related]

  • 10. Theory of self-contact in Kirchhoff rods with applications to supercoiling of knotted and unknotted DNA plasmids.
    Coleman BD, Swigon D.
    Philos Trans A Math Phys Eng Sci; 2004 Jul 15; 362(1820):1281-99. PubMed ID: 15306451
    [Abstract] [Full Text] [Related]

  • 11. Modelling DNA loops using continuum and statistical mechanics.
    Balaeff A, Koudella CR, Mahadevan L, Schulten K.
    Philos Trans A Math Phys Eng Sci; 2004 Jul 15; 362(1820):1355-71. PubMed ID: 15306455
    [Abstract] [Full Text] [Related]

  • 12.
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  • 13. The structural basis of DNA flexibility.
    Travers AA.
    Philos Trans A Math Phys Eng Sci; 2004 Jul 15; 362(1820):1423-38. PubMed ID: 15306459
    [Abstract] [Full Text] [Related]

  • 14. Large-scale molecular dynamics simulation of DNA: implementation and validation of the AMBER98 force field in LAMMPS.
    Grindon C, Harris S, Evans T, Novik K, Coveney P, Laughton C.
    Philos Trans A Math Phys Eng Sci; 2004 Jul 15; 362(1820):1373-86. PubMed ID: 15306456
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  • 16. Molecular dynamics simulations of a r(GA12G).d(CT12C) hybrid duplex.
    Fritsch V, Wolf RM.
    J Biomol Struct Dyn; 1994 Jun 15; 11(6):1161-74. PubMed ID: 7524540
    [Abstract] [Full Text] [Related]

  • 17. Nucleosome conformational flexibility and implications for chromatin dynamics.
    Sivolob A, Prunell A.
    Philos Trans A Math Phys Eng Sci; 2004 Jul 15; 362(1820):1519-47. PubMed ID: 15306464
    [Abstract] [Full Text] [Related]

  • 18. A simple, non-nucleosidic base surrogate increases the duplex stability of DNA containing an abasic site.
    Langenegger SM, Häner R.
    Chem Biodivers; 2004 Feb 15; 1(2):259-64. PubMed ID: 17191844
    [Abstract] [Full Text] [Related]

  • 19. Differential DNA recognition by the enantiomers of 1-Rh(MGP)2 phi: a combination of shape selection and direct readout.
    Franklin SJ, Barton JK.
    Biochemistry; 1998 Nov 17; 37(46):16093-105. PubMed ID: 9819202
    [Abstract] [Full Text] [Related]

  • 20. NMR structure of the DNA decamer duplex containing double T*G mismatches of cis-syn cyclobutane pyrimidine dimer: implications for DNA damage recognition by the XPC-hHR23B complex.
    Lee JH, Park CJ, Shin JS, Ikegami T, Akutsu H, Choi BS.
    Nucleic Acids Res; 2004 Nov 17; 32(8):2474-81. PubMed ID: 15121904
    [Abstract] [Full Text] [Related]

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