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82 related items for PubMed ID: 15451434

  • 1. Quantum chemical analysis explains hemagglutinin peptide-MHC Class II molecule HLA-DRbeta1*0101 interactions.
    Cárdenas C, Villaveces JL, Bohórquez H, Llanos E, Suárez C, Obregón M, Patarroyo ME.
    Biochem Biophys Res Commun; 2004 Oct 29; 323(4):1265-77. PubMed ID: 15451434
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  • 4. A comparative study of MHC Class-II HLA-DRbeta1*0401-Col II and HLA-DRbeta1*0101-HA complexes: a theoretical point of view.
    Cárdenas C, Villaveces JL, Suárez C, Obregón M, Ortiz M, Patarroyo ME.
    J Struct Biol; 2005 Jan 29; 149(1):38-52. PubMed ID: 15629656
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  • 7. Electrostatic potential as a tool to understand interactions between malaria vaccine candidate peptides and MHC II molecules.
    Agudelo WA, Galindo JF, Patarroyo ME.
    Biochem Biophys Res Commun; 2011 Jul 08; 410(3):410-5. PubMed ID: 21672519
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  • 8. A predictive method for the evaluation of peptide binding in pocket 1 of HLA-DRB1 via global minimization of energy interactions.
    Androulakis IP, Nayak NN, Ierapetritou MG, Monos DS, Floudas CA.
    Proteins; 1997 Sep 08; 29(1):87-102. PubMed ID: 9294869
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  • 9. The relative energetic contributions of dominant P1 pocket versus hydrogen bonding interactions to peptide:class II stability: implications for the mechanism of DM function.
    Bandyopadhyay A, Arneson L, Beeson C, Sant AJ.
    Mol Immunol; 2008 Mar 08; 45(5):1248-57. PubMed ID: 17980431
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  • 10. Variations in the electrostatic landscape of class II human leukocyte antigen molecule induced by modifications in the myelin basic protein peptide: a theoretical approach.
    Agudelo WA, Galindo JF, Ortiz M, Villaveces JL, Daza EE, Patarroyo ME.
    PLoS One; 2009 Mar 08; 4(1):e4164. PubMed ID: 19132105
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  • 12. Structural principles that govern the peptide-binding motifs of class I MHC molecules.
    Zhang C, Anderson A, DeLisi C.
    J Mol Biol; 1998 Sep 04; 281(5):929-47. PubMed ID: 9719645
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  • 14. Peptides inducing short-lived antibody responses against Plasmodium falciparum malaria have shorter structures and are read in a different MHC II functional register.
    Patarroyo ME, Alba MP, Vargas LE, Silva Y, Rosas J, Rodríguez R.
    Biochemistry; 2005 May 10; 44(18):6745-54. PubMed ID: 15865420
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  • 16. Differential tapasin dependence of MHC class I molecules correlates with conformational changes upon peptide dissociation: a molecular dynamics simulation study.
    Sieker F, Straatsma TP, Springer S, Zacharias M.
    Mol Immunol; 2008 Aug 10; 45(14):3714-22. PubMed ID: 18639935
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  • 17. Flexibility of the MHC class II peptide binding cleft in the bound, partially filled, and empty states: a molecular dynamics simulation study.
    Yaneva R, Springer S, Zacharias M.
    Biopolymers; 2009 Jan 10; 91(1):14-27. PubMed ID: 18767126
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  • 18. A Bayesian regression approach to the prediction of MHC-II binding affinity.
    Zhang W, Liu J, Niu YQ, Wang L, Hu X.
    Comput Methods Programs Biomed; 2008 Oct 10; 92(1):1-7. PubMed ID: 18562039
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  • 19. Peptide-binding motifs for the I-Ad MHC class II molecule: alternate pH-dependent binding behavior.
    Chaves FA, Richards KA, Torelli A, Wedekind J, Sant AJ.
    Biochemistry; 2006 May 23; 45(20):6426-33. PubMed ID: 16700553
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