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200 related items for PubMed ID: 15507140

  • 1. Identification and utilization of inter-species conserved (ISC) probesets on Affymetrix human GeneChip platforms for the optimization of the assessment of expression patterns in non human primate (NHP) samples.
    Wang Z, Lewis MG, Nau ME, Arnold A, Vahey MT.
    BMC Bioinformatics; 2004 Oct 26; 5():165. PubMed ID: 15507140
    [Abstract] [Full Text] [Related]

  • 2. Comparison of non-human primate and human whole blood tissue gene expression profiles.
    Dillman JF, Phillips CS.
    Toxicol Sci; 2005 Sep 26; 87(1):306-14. PubMed ID: 15976184
    [Abstract] [Full Text] [Related]

  • 3. Quality assessment of the Affymetrix U133A&B probesets by target sequence mapping and expression data analysis.
    Orlov YL, Zhou J, Lipovich L, Shahab A, Kuznetsov VA.
    In Silico Biol; 2007 Sep 26; 7(3):241-60. PubMed ID: 18415975
    [Abstract] [Full Text] [Related]

  • 4. Long versus short oligonucleotide microarrays for the study of gene expression in nonhuman primates.
    Walker SJ, Wang Y, Grant KA, Chan F, Hellmann GM.
    J Neurosci Methods; 2006 Apr 15; 152(1-2):179-89. PubMed ID: 16253343
    [Abstract] [Full Text] [Related]

  • 5. Characterization of mismatch and high-signal intensity probes associated with Affymetrix genechips.
    Wang Y, Miao ZH, Pommier Y, Kawasaki ES, Player A.
    Bioinformatics; 2007 Aug 15; 23(16):2088-95. PubMed ID: 17553856
    [Abstract] [Full Text] [Related]

  • 6. In vitro identification and in silico utilization of interspecies sequence similarities using GeneChip technology.
    Grigoryev DN, Ma SF, Simon BA, Irizarry RA, Ye SQ, Garcia JG.
    BMC Genomics; 2005 May 04; 6():62. PubMed ID: 15871745
    [Abstract] [Full Text] [Related]

  • 7. Nucleotide sequences, polymorphism and gene deletion of T cell receptor beta-chain constant regions of Pan troglodytes and Macaca mulatta.
    Jaeger EE, Bontrop RE, Lanchbury JS.
    J Immunol; 1993 Nov 15; 151(10):5301-9. PubMed ID: 7901278
    [Abstract] [Full Text] [Related]

  • 8. Intercenter reliability and validity of the rhesus macaque GeneChip.
    Duan F, Spindel ER, Li YH, Norgren RB.
    BMC Genomics; 2007 Feb 28; 8():61. PubMed ID: 17328815
    [Abstract] [Full Text] [Related]

  • 9. Transcript-level annotation of Affymetrix probesets improves the interpretation of gene expression data.
    Yu H, Wang F, Tu K, Xie L, Li YY, Li YX.
    BMC Bioinformatics; 2007 Jun 11; 8():194. PubMed ID: 17559689
    [Abstract] [Full Text] [Related]

  • 10. Widespread existence of uncorrelated probe intensities from within the same probeset on Affymetrix GeneChips.
    Sanchez-Graillet O, Rowsell J, Langdon WB, Stalteri M, Arteaga-Salas JM, Upton GJ, Harrison AP.
    J Integr Bioinform; 2008 Aug 25; 5(2):. PubMed ID: 20134059
    [Abstract] [Full Text] [Related]

  • 11. ADAPT: a database of affymetrix probesets and transcripts.
    Leong HS, Yates T, Wilson C, Miller CJ.
    Bioinformatics; 2005 May 15; 21(10):2552-3. PubMed ID: 15746287
    [Abstract] [Full Text] [Related]

  • 12. Evaluation of the similarity of gene expression data estimated with SAGE and Affymetrix GeneChips.
    van Ruissen F, Ruijter JM, Schaaf GJ, Asgharnegad L, Zwijnenburg DA, Kool M, Baas F.
    BMC Genomics; 2005 Jun 14; 6():91. PubMed ID: 15955238
    [Abstract] [Full Text] [Related]

  • 13. A verification protocol for the probe sequences of Affymetrix genome arrays reveals high probe accuracy for studies in mouse, human and rat.
    Alberts R, Terpstra P, Hardonk M, Bystrykh LV, de Haan G, Breitling R, Nap JP, Jansen RC.
    BMC Bioinformatics; 2007 Apr 20; 8():132. PubMed ID: 17448222
    [Abstract] [Full Text] [Related]

  • 14. Gene expression profiling in the rhesus macaque: methodology, annotation and data interpretation.
    Noriega NC, Kohama SG, Urbanski HF.
    Methods; 2009 Sep 20; 49(1):42-9. PubMed ID: 19467334
    [Abstract] [Full Text] [Related]

  • 15. Leveraging human genomic information to identify nonhuman primate sequences for expression array development.
    Spindel ER, Pauley MA, Jia Y, Gravett C, Thompson SL, Boyle NF, Ojeda SR, Norgren RB.
    BMC Genomics; 2005 Nov 15; 6():160. PubMed ID: 16288651
    [Abstract] [Full Text] [Related]

  • 16. A sequence-based identification of the genes detected by probesets on the Affymetrix U133 plus 2.0 array.
    Harbig J, Sprinkle R, Enkemann SA.
    Nucleic Acids Res; 2005 Feb 18; 33(3):e31. PubMed ID: 15722477
    [Abstract] [Full Text] [Related]

  • 17. Systematic order-dependent effect in expression values, variance, detection calls and differential expression in Affymetrix GeneChips.
    Bjork KE, Kafadar K.
    Bioinformatics; 2007 Nov 01; 23(21):2873-80. PubMed ID: 17897972
    [Abstract] [Full Text] [Related]

  • 18. Microarray analysis of relative gene expression stability for selection of internal reference genes in the rhesus macaque brain.
    Noriega NC, Kohama SG, Urbanski HF.
    BMC Mol Biol; 2010 Jun 21; 11():47. PubMed ID: 20565976
    [Abstract] [Full Text] [Related]

  • 19. Highly expressed genes in pancreatic ductal adenocarcinomas: a comprehensive characterization and comparison of the transcription profiles obtained from three major technologies.
    Iacobuzio-Donahue CA, Ashfaq R, Maitra A, Adsay NV, Shen-Ong GL, Berg K, Hollingsworth MA, Cameron JL, Yeo CJ, Kern SE, Goggins M, Hruban RH.
    Cancer Res; 2003 Dec 15; 63(24):8614-22. PubMed ID: 14695172
    [Abstract] [Full Text] [Related]

  • 20. Cross-species comparison of gene expression between human and porcine tissue, using single microarray platform--preliminary results.
    Shah G, Azizian M, Bruch D, Mehta R, Kittur D.
    Clin Transplant; 2004 Dec 15; 18 Suppl 12():76-80. PubMed ID: 15217413
    [Abstract] [Full Text] [Related]

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