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Journal Abstract Search

414 related items for PubMed ID: 15527510

  • 1. ESTIMA, a tool for EST management in a multi-project environment.
    Kumar CG, LeDuc R, Gong G, Roinishivili L, Lewin HA, Liu L.
    BMC Bioinformatics; 2004 Nov 04; 5():176. PubMed ID: 15527510
    [Abstract] [Full Text] [Related]

  • 2. JUICE: a data management system that facilitates the analysis of large volumes of information in an EST project workflow.
    Latorre M, Silva H, Saba J, Guziolowski C, Vizoso P, Martinez V, Maldonado J, Morales A, Caroca R, Cambiazo V, Campos-Vargas R, Gonzalez M, Orellana A, Retamales J, Meisel LA.
    BMC Bioinformatics; 2006 Nov 23; 7():513. PubMed ID: 17123449
    [Abstract] [Full Text] [Related]

  • 3. Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index.
    Carre W, Wang X, Porter TE, Nys Y, Tang J, Bernberg E, Morgan R, Burnside J, Aggrey SE, Simon J, Cogburn LA.
    Physiol Genomics; 2006 May 16; 25(3):514-24. PubMed ID: 16554550
    [Abstract] [Full Text] [Related]

  • 4. ESTree db: a tool for peach functional genomics.
    Lazzari B, Caprera A, Vecchietti A, Stella A, Milanesi L, Pozzi C.
    BMC Bioinformatics; 2005 Dec 01; 6 Suppl 4(Suppl 4):S16. PubMed ID: 16351742
    [Abstract] [Full Text] [Related]

  • 5. ESTExplorer: an expressed sequence tag (EST) assembly and annotation platform.
    Nagaraj SH, Deshpande N, Gasser RB, Ranganathan S.
    Nucleic Acids Res; 2007 Jul 01; 35(Web Server issue):W143-7. PubMed ID: 17545197
    [Abstract] [Full Text] [Related]

  • 6. EST processing: from trace to sequence.
    Schmid R, Blaxter M.
    Methods Mol Biol; 2009 Jul 01; 533():189-220. PubMed ID: 19277557
    [Abstract] [Full Text] [Related]

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  • 8. EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarray expression data integration.
    Forment J, Gilabert F, Robles A, Conejero V, Nuez F, Blanca JM.
    BMC Bioinformatics; 2008 Jan 07; 9():5. PubMed ID: 18179701
    [Abstract] [Full Text] [Related]

  • 9. The TIGR Gene Indices: clustering and assembling EST and known genes and integration with eukaryotic genomes.
    Lee Y, Tsai J, Sunkara S, Karamycheva S, Pertea G, Sultana R, Antonescu V, Chan A, Cheung F, Quackenbush J.
    Nucleic Acids Res; 2005 Jan 01; 33(Database issue):D71-4. PubMed ID: 15608288
    [Abstract] [Full Text] [Related]

  • 10. OrchidBase: a collection of sequences of the transcriptome derived from orchids.
    Fu CH, Chen YW, Hsiao YY, Pan ZJ, Liu ZJ, Huang YM, Tsai WC, Chen HH.
    Plant Cell Physiol; 2011 Feb 01; 52(2):238-43. PubMed ID: 21245031
    [Abstract] [Full Text] [Related]

  • 11. ConiferEST: an integrated bioinformatics system for data reprocessing and mining of conifer expressed sequence tags (ESTs).
    Liang C, Wang G, Liu L, Ji G, Fang L, Liu Y, Carter K, Webb JS, Dean JF.
    BMC Genomics; 2007 May 29; 8():134. PubMed ID: 17535431
    [Abstract] [Full Text] [Related]

  • 12. Plant Gene and Alternatively Spliced Variant Annotator. A plant genome annotation pipeline for rice gene and alternatively spliced variant identification with cross-species expressed sequence tag conservation from seven plant species.
    Chen FC, Wang SS, Chaw SM, Huang YT, Chuang TJ.
    Plant Physiol; 2007 Mar 29; 143(3):1086-95. PubMed ID: 17220363
    [Abstract] [Full Text] [Related]

  • 13. A conifer genomics resource of 200,000 spruce (Picea spp.) ESTs and 6,464 high-quality, sequence-finished full-length cDNAs for Sitka spruce (Picea sitchensis).
    Ralph SG, Chun HJ, Kolosova N, Cooper D, Oddy C, Ritland CE, Kirkpatrick R, Moore R, Barber S, Holt RA, Jones SJ, Marra MA, Douglas CJ, Ritland K, Bohlmann J.
    BMC Genomics; 2008 Oct 14; 9():484. PubMed ID: 18854048
    [Abstract] [Full Text] [Related]

  • 14. A hitchhiker's guide to expressed sequence tag (EST) analysis.
    Nagaraj SH, Gasser RB, Ranganathan S.
    Brief Bioinform; 2007 Jan 14; 8(1):6-21. PubMed ID: 16772268
    [Abstract] [Full Text] [Related]

  • 15. Identitag, a relational database for SAGE tag identification and interspecies comparison of SAGE libraries.
    Keime C, Damiola F, Mouchiroud D, Duret L, Gandrillon O.
    BMC Bioinformatics; 2004 Oct 06; 5():143. PubMed ID: 15469608
    [Abstract] [Full Text] [Related]

  • 16. Pepper EST database: comprehensive in silico tool for analyzing the chili pepper (Capsicum annuum) transcriptome.
    Kim HJ, Baek KH, Lee SW, Kim J, Lee BW, Cho HS, Kim WT, Choi D, Hur CG.
    BMC Plant Biol; 2008 Oct 09; 8():101. PubMed ID: 18844979
    [Abstract] [Full Text] [Related]

  • 17. ESAP plus: a web-based server for EST-SSR marker development.
    Ponyared P, Ponsawat J, Tongsima S, Seresangtakul P, Akkasaeng C, Tantisuwichwong N.
    BMC Genomics; 2016 Dec 22; 17(Suppl 13):1035. PubMed ID: 28155670
    [Abstract] [Full Text] [Related]

  • 18. PESTAS: a web server for EST analysis and sequence mining.
    Nam SH, Kim DW, Jung TS, Choi YS, Kim DW, Choi HS, Choi SH, Park HS.
    Bioinformatics; 2009 Jul 15; 25(14):1846-8. PubMed ID: 19414531
    [Abstract] [Full Text] [Related]

  • 19. GeneTools--application for functional annotation and statistical hypothesis testing.
    Beisvag V, Jünge FK, Bergum H, Jølsum L, Lydersen S, Günther CC, Ramampiaro H, Langaas M, Sandvik AK, Laegreid A.
    BMC Bioinformatics; 2006 Oct 24; 7():470. PubMed ID: 17062145
    [Abstract] [Full Text] [Related]

  • 20. Penaeus monodon gene discovery project: the generation of an EST collection and establishment of a database.
    Tassanakajon A, Klinbunga S, Paunglarp N, Rimphanitchayakit V, Udomkit A, Jitrapakdee S, Sritunyalucksana K, Phongdara A, Pongsomboon S, Supungul P, Tang S, Kuphanumart K, Pichyangkura R, Lursinsap C.
    Gene; 2006 Dec 15; 384():104-12. PubMed ID: 16945489
    [Abstract] [Full Text] [Related]

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