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Journal Abstract Search

576 related items for PubMed ID: 15558052

  • 1. The role of modifications in codon discrimination by tRNA(Lys)UUU.
    Murphy FV, Ramakrishnan V, Malkiewicz A, Agris PF.
    Nat Struct Mol Biol; 2004 Dec; 11(12):1186-91. PubMed ID: 15558052
    [Abstract] [Full Text] [Related]

  • 2. Structural effects of hypermodified nucleosides in the Escherichia coli and human tRNALys anticodon loop: the effect of nucleosides s2U, mcm5U, mcm5s2U, mnm5s2U, t6A, and ms2t6A.
    Durant PC, Bajji AC, Sundaram M, Kumar RK, Davis DR.
    Biochemistry; 2005 Jun 07; 44(22):8078-89. PubMed ID: 15924427
    [Abstract] [Full Text] [Related]

  • 3. Human tRNA(Lys3)(UUU) is pre-structured by natural modifications for cognate and wobble codon binding through keto-enol tautomerism.
    Vendeix FA, Murphy FV, Cantara WA, Leszczyńska G, Gustilo EM, Sproat B, Malkiewicz A, Agris PF.
    J Mol Biol; 2012 Mar 02; 416(4):467-85. PubMed ID: 22227389
    [Abstract] [Full Text] [Related]

  • 4. Wobble during decoding: more than third-position promiscuity.
    Cochella L, Green R.
    Nat Struct Mol Biol; 2004 Dec 02; 11(12):1160-2. PubMed ID: 15578054
    [No Abstract] [Full Text] [Related]

  • 5. Preferences of AAA/AAG codon recognition by modified nucleosides, τm5s2U34 and t6A37 present in tRNALys.
    Sonawane KD, Kamble AS, Fandilolu PM.
    J Biomol Struct Dyn; 2018 Dec 02; 36(16):4182-4196. PubMed ID: 29243556
    [Abstract] [Full Text] [Related]

  • 6. Anticodon domain modifications contribute order to tRNA for ribosome-mediated codon binding.
    Vendeix FA, Dziergowska A, Gustilo EM, Graham WD, Sproat B, Malkiewicz A, Agris PF.
    Biochemistry; 2008 Jun 10; 47(23):6117-29. PubMed ID: 18473483
    [Abstract] [Full Text] [Related]

  • 7. Modified nucleoside dependent Watson-Crick and wobble codon binding by tRNALysUUU species.
    Yarian C, Marszalek M, Sochacka E, Malkiewicz A, Guenther R, Miskiewicz A, Agris PF.
    Biochemistry; 2000 Nov 07; 39(44):13390-5. PubMed ID: 11063576
    [Abstract] [Full Text] [Related]

  • 8. tRNA's wobble decoding of the genome: 40 years of modification.
    Agris PF, Vendeix FA, Graham WD.
    J Mol Biol; 2007 Feb 09; 366(1):1-13. PubMed ID: 17187822
    [Abstract] [Full Text] [Related]

  • 9. Wobble modification defect in tRNA disturbs codon-anticodon interaction in a mitochondrial disease.
    Yasukawa T, Suzuki T, Ishii N, Ohta S, Watanabe K.
    EMBO J; 2001 Sep 03; 20(17):4794-802. PubMed ID: 11532943
    [Abstract] [Full Text] [Related]

  • 10. Energetics of codon-anticodon recognition on the small ribosomal subunit.
    Almlöf M, Andér M, Aqvist J.
    Biochemistry; 2007 Jan 09; 46(1):200-9. PubMed ID: 17198390
    [Abstract] [Full Text] [Related]

  • 11. Functional anticodon architecture of human tRNALys3 includes disruption of intraloop hydrogen bonding by the naturally occurring amino acid modification, t6A.
    Stuart JW, Gdaniec Z, Guenther R, Marszalek M, Sochacka E, Malkiewicz A, Agris PF.
    Biochemistry; 2000 Nov 07; 39(44):13396-404. PubMed ID: 11063577
    [Abstract] [Full Text] [Related]

  • 12. Analysis of action of wobble nucleoside modifications on codon-anticodon pairing within the ribosome.
    Lim VI.
    J Mol Biol; 1994 Jul 01; 240(1):8-19. PubMed ID: 8021943
    [Abstract] [Full Text] [Related]

  • 13. Hypermodified nucleosides in the anticodon of tRNALys stabilize a canonical U-turn structure.
    Sundaram M, Durant PC, Davis DR.
    Biochemistry; 2000 Oct 17; 39(41):12575-84. PubMed ID: 11027137
    [Abstract] [Full Text] [Related]

  • 14. The crystal structure of HIV reverse-transcription primer tRNA(Lys,3) shows a canonical anticodon loop.
    Bénas P, Bec G, Keith G, Marquet R, Ehresmann C, Ehresmann B, Dumas P.
    RNA; 2000 Oct 17; 6(10):1347-55. PubMed ID: 11073212
    [Abstract] [Full Text] [Related]

  • 15. Modified nucleotides in tRNA(Lys) and tRNA(Val) are important for translocation.
    Phelps SS, Malkiewicz A, Agris PF, Joseph S.
    J Mol Biol; 2004 Apr 30; 338(3):439-44. PubMed ID: 15081802
    [Abstract] [Full Text] [Related]

  • 16. Possible conformations of 5-aminomethyluridine derivatives recognizing a G at the third position of the codon.
    Takai K.
    Nucleic Acids Symp Ser (Oxf); 2005 Apr 30; (49):317-8. PubMed ID: 17150761
    [Abstract] [Full Text] [Related]

  • 17. A new understanding of the decoding principle on the ribosome.
    Demeshkina N, Jenner L, Westhof E, Yusupov M, Yusupova G.
    Nature; 2012 Mar 21; 484(7393):256-9. PubMed ID: 22437501
    [Abstract] [Full Text] [Related]

  • 18. On the mechanism of leftward frameshifting at several hungry codons.
    Barak Z, Lindsley D, Gallant J.
    J Mol Biol; 1996 Mar 08; 256(4):676-84. PubMed ID: 8642590
    [Abstract] [Full Text] [Related]

  • 19. The effect of pseudouridine and pH on the structure and dynamics of the anticodon stem-loop of tRNA(Lys,3).
    Durant PC, Davis DR.
    Nucleic Acids Symp Ser; 1997 Mar 08; (36):56-7. PubMed ID: 9478205
    [Abstract] [Full Text] [Related]

  • 20. Modifications modulate anticodon loop dynamics and codon recognition of E. coli tRNA(Arg1,2).
    Cantara WA, Bilbille Y, Kim J, Kaiser R, Leszczyńska G, Malkiewicz A, Agris PF.
    J Mol Biol; 2012 Mar 02; 416(4):579-97. PubMed ID: 22240457
    [Abstract] [Full Text] [Related]

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