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Journal Abstract Search

172 related items for PubMed ID: 15608125

  • 1. Thermodynamic consequences of disrupting a water-mediated hydrogen bond network in a protein:pheromone complex.
    Sharrow SD, Edmonds KA, Goodman MA, Novotny MV, Stone MJ.
    Protein Sci; 2005 Jan; 14(1):249-56. PubMed ID: 15608125
    [Abstract] [Full Text] [Related]

  • 2. Thermodynamic analysis of binding between mouse major urinary protein-I and the pheromone 2-sec-butyl-4,5-dihydrothiazole.
    Sharrow SD, Novotny MV, Stone MJ.
    Biochemistry; 2003 May 27; 42(20):6302-9. PubMed ID: 12755635
    [Abstract] [Full Text] [Related]

  • 3. High resolution X-ray structures of mouse major urinary protein nasal isoform in complex with pheromones.
    Perez-Miller S, Zou Q, Novotny MV, Hurley TD.
    Protein Sci; 2010 Aug 27; 19(8):1469-79. PubMed ID: 20509168
    [Abstract] [Full Text] [Related]

  • 4. Pheromone binding by polymorphic mouse major urinary proteins.
    Sharrow SD, Vaughn JL, Zídek L, Novotny MV, Stone MJ.
    Protein Sci; 2002 Sep 27; 11(9):2247-56. PubMed ID: 12192080
    [Abstract] [Full Text] [Related]

  • 5. Structural basis of pheromone binding to mouse major urinary protein (MUP-I).
    Timm DE, Baker LJ, Mueller H, Zidek L, Novotny MV.
    Protein Sci; 2001 May 27; 10(5):997-1004. PubMed ID: 11316880
    [Abstract] [Full Text] [Related]

  • 6. NMR mapping of the recombinant mouse major urinary protein I binding site occupied by the pheromone 2-sec-butyl-4,5-dihydrothiazole.
    Zídek L, Stone MJ, Lato SM, Pagel MD, Miao Z, Ellington AD, Novotny MV.
    Biochemistry; 1999 Aug 03; 38(31):9850-61. PubMed ID: 10433691
    [Abstract] [Full Text] [Related]

  • 7. Van der Waals interactions dominate ligand-protein association in a protein binding site occluded from solvent water.
    Barratt E, Bingham RJ, Warner DJ, Laughton CA, Phillips SE, Homans SW.
    J Am Chem Soc; 2005 Aug 24; 127(33):11827-34. PubMed ID: 16104761
    [Abstract] [Full Text] [Related]

  • 8. Increased protein backbone conformational entropy upon hydrophobic ligand binding.
    Zídek L, Novotny MV, Stone MJ.
    Nat Struct Biol; 1999 Dec 24; 6(12):1118-21. PubMed ID: 10581552
    [Abstract] [Full Text] [Related]

  • 9. Thermodynamics of buried water clusters at a protein-ligand binding interface.
    Li Z, Lazaridis T.
    J Phys Chem B; 2006 Jan 26; 110(3):1464-75. PubMed ID: 16471698
    [Abstract] [Full Text] [Related]

  • 10. Structure-thermodynamics-relationships of hepatitis C viral NS3 protease inhibitors.
    Wypych RM, LaPlante SR, White PW, Martin SF.
    Eur J Med Chem; 2020 Apr 15; 192():112195. PubMed ID: 32151833
    [Abstract] [Full Text] [Related]

  • 11. The binding cavity of mouse major urinary protein is optimised for a variety of ligand binding modes.
    Pertinhez TA, Ferrari E, Casali E, Patel JA, Spisni A, Smith LJ.
    Biochem Biophys Res Commun; 2009 Dec 25; 390(4):1266-71. PubMed ID: 19878650
    [Abstract] [Full Text] [Related]

  • 12. Influence of neighboring groups on the thermodynamics of hydrophobic binding: an added complex facet to the hydrophobic effect.
    Nasief NN, Hangauer D.
    J Med Chem; 2014 Mar 27; 57(6):2315-33. PubMed ID: 24479949
    [Abstract] [Full Text] [Related]

  • 13. Enthalpy of hydrogen bond formation in a protein-ligand binding reaction.
    Connelly PR, Aldape RA, Bruzzese FJ, Chambers SP, Fitzgibbon MJ, Fleming MA, Itoh S, Livingston DJ, Navia MA, Thomson JA.
    Proc Natl Acad Sci U S A; 1994 Mar 01; 91(5):1964-8. PubMed ID: 7510408
    [Abstract] [Full Text] [Related]

  • 14. Involvement of water in carbohydrate-protein binding.
    Clarke C, Woods RJ, Gluska J, Cooper A, Nutley MA, Boons GJ.
    J Am Chem Soc; 2001 Dec 12; 123(49):12238-47. PubMed ID: 11734024
    [Abstract] [Full Text] [Related]

  • 15. Water makes the difference: rearrangement of water solvation layer triggers non-additivity of functional group contributions in protein-ligand binding.
    Biela A, Betz M, Heine A, Klebe G.
    ChemMedChem; 2012 Aug 12; 7(8):1423-34. PubMed ID: 22733601
    [Abstract] [Full Text] [Related]

  • 16. Fluoroalkyl and alkyl chains have similar hydrophobicities in binding to the "hydrophobic wall" of carbonic anhydrase.
    Mecinović J, Snyder PW, Mirica KA, Bai S, Mack ET, Kwant RL, Moustakas DT, Héroux A, Whitesides GM.
    J Am Chem Soc; 2011 Sep 07; 133(35):14017-26. PubMed ID: 21790183
    [Abstract] [Full Text] [Related]

  • 17. Thermodynamic dissection of the binding energetics of proline-rich peptides to the Abl-SH3 domain: implications for rational ligand design.
    Palencia A, Cobos ES, Mateo PL, Martínez JC, Luque I.
    J Mol Biol; 2004 Feb 13; 336(2):527-37. PubMed ID: 14757063
    [Abstract] [Full Text] [Related]

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  • 20. Artificial protein cavities as specific ligand-binding templates: characterization of an engineered heterocyclic cation-binding site that preserves the evolved specificity of the parent protein.
    Musah RA, Jensen GM, Bunte SW, Rosenfeld RJ, Goodin DB.
    J Mol Biol; 2002 Jan 25; 315(4):845-57. PubMed ID: 11812152
    [Abstract] [Full Text] [Related]

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