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262 related items for PubMed ID: 15698282

  • 21. Partly melted DNA conformations obtained with a probability peak finding method.
    Tøstesen E.
    Phys Rev E Stat Nonlin Soft Matter Phys; 2005 Jun; 71(6 Pt 1):061922. PubMed ID: 16089780
    [Abstract] [Full Text] [Related]

  • 22. Stochastic dynamics and denaturation of thermalized DNA.
    Deng ML, Zhu WQ.
    Phys Rev E Stat Nonlin Soft Matter Phys; 2008 Feb; 77(2 Pt 1):021918. PubMed ID: 18352062
    [Abstract] [Full Text] [Related]

  • 23. On the discrete Peyrard-Bishop model of DNA: stationary solutions and stability.
    Cuenda S, Sánchez A.
    Chaos; 2006 Jun; 16(2):023123. PubMed ID: 16822026
    [Abstract] [Full Text] [Related]

  • 24. Bubble nucleation and cooperativity in DNA melting.
    Zeng Y, Montrichok A, Zocchi G.
    J Mol Biol; 2004 May 21; 339(1):67-75. PubMed ID: 15123421
    [Abstract] [Full Text] [Related]

  • 25. Single-molecule unzippering experiments on DNA and Peyrard-Bishop-Dauxois model.
    Zdravković S, Satarić MV.
    Phys Rev E Stat Nonlin Soft Matter Phys; 2006 Feb 21; 73(2 Pt 1):021905. PubMed ID: 16605360
    [Abstract] [Full Text] [Related]

  • 26. A fractional programming approach to efficient DNA melting temperature calculation.
    Leber M, Kaderali L, Schönhuth A, Schrader R.
    Bioinformatics; 2005 May 15; 21(10):2375-82. PubMed ID: 15769839
    [Abstract] [Full Text] [Related]

  • 27. Bubble relaxation dynamics in double-stranded DNA.
    Bicout DJ, Kats E.
    Phys Rev E Stat Nonlin Soft Matter Phys; 2004 Jul 15; 70(1 Pt 1):010902. PubMed ID: 15324035
    [Abstract] [Full Text] [Related]

  • 28. Probing the mechanical unzipping of DNA.
    Voulgarakis NK, Redondo A, Bishop AR, Rasmussen KØ.
    Phys Rev Lett; 2006 Jun 23; 96(24):248101. PubMed ID: 16907282
    [Abstract] [Full Text] [Related]

  • 29. Melting of genomic DNA: Predictive modeling by nonlinear lattice dynamics.
    Theodorakopoulos N.
    Phys Rev E Stat Nonlin Soft Matter Phys; 2010 Aug 23; 82(2 Pt 1):021905. PubMed ID: 20866835
    [Abstract] [Full Text] [Related]

  • 30. DNA unzipping phase diagram calculated via replica theory.
    Roland CB, Hatch KA, Prentiss M, Shakhnovich EI.
    Phys Rev E Stat Nonlin Soft Matter Phys; 2009 May 23; 79(5 Pt 1):051923. PubMed ID: 19518496
    [Abstract] [Full Text] [Related]

  • 31. Master equation approach to DNA breathing in heteropolymer DNA.
    Ambjörnsson T, Banik SK, Lomholt MA, Metzler R.
    Phys Rev E Stat Nonlin Soft Matter Phys; 2007 Feb 23; 75(2 Pt 1):021908. PubMed ID: 17358368
    [Abstract] [Full Text] [Related]

  • 32. Melting transition of oriented Li-DNA fibers submerged in ethanol solutions.
    González A, Wildes AR, Mossou E, Cristiglio V, Moiroux G, Garden JL, Cuesta-López S, Theodorakopoulos N, Peyrard M.
    Biopolymers; 2021 Mar 23; 112(3):e23422. PubMed ID: 33600618
    [Abstract] [Full Text] [Related]

  • 33. Thermal denaturation of DNA studied with neutron scattering.
    Wildes A, Theodorakopoulos N, Valle-Orero J, Cuesta-López S, Garden JL, Peyrard M.
    Phys Rev Lett; 2011 Jan 28; 106(4):048101. PubMed ID: 21405364
    [Abstract] [Full Text] [Related]

  • 34. Dependence on temperature and guanine-cytosine content of bubble length distributions in DNA.
    Kalosakas G, Ares S.
    J Chem Phys; 2009 Jun 21; 130(23):235104. PubMed ID: 19548765
    [Abstract] [Full Text] [Related]

  • 35. Slow closure of denaturation bubbles in DNA: twist matters.
    Dasanna AK, Destainville N, Palmeri J, Manghi M.
    Phys Rev E Stat Nonlin Soft Matter Phys; 2013 May 21; 87(5):052703. PubMed ID: 23767562
    [Abstract] [Full Text] [Related]

  • 36. DNA denaturation bubbles: free-energy landscape and nucleation/closure rates.
    Sicard F, Destainville N, Manghi M.
    J Chem Phys; 2015 Jan 21; 142(3):034903. PubMed ID: 25612729
    [Abstract] [Full Text] [Related]

  • 37. A semiflexible chain model of local denaturation in double-stranded DNA.
    Jeon JH, Sung W, Ree FH.
    J Chem Phys; 2006 Apr 28; 124(16):164905. PubMed ID: 16674168
    [Abstract] [Full Text] [Related]

  • 38. Direct observation of large temperature fluctuations during DNA thermal denaturation.
    Nagapriya KS, Raychaudhuri AK, Chatterji D.
    Phys Rev Lett; 2006 Jan 27; 96(3):038102. PubMed ID: 16486776
    [Abstract] [Full Text] [Related]

  • 39. Scaling laws at the phase transition of systems with divergent order parameter and/or internal length: the example of DNA denaturation.
    Buyukdagli S, Joyeux M.
    Phys Rev E Stat Nonlin Soft Matter Phys; 2006 May 27; 73(5 Pt 1):051910. PubMed ID: 16802970
    [Abstract] [Full Text] [Related]

  • 40. Dynamics of DNA breathing: weak noise analysis, finite time singularity, and mapping onto the quantum Coulomb problem.
    Fogedby HC, Metzler R.
    Phys Rev E Stat Nonlin Soft Matter Phys; 2007 Dec 27; 76(6 Pt 1):061915. PubMed ID: 18233877
    [Abstract] [Full Text] [Related]

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