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Journal Abstract Search

476 related items for PubMed ID: 15701509

  • 1. Methylation of cytosine at C5 in a CpG sequence context causes a conformational switch of a benzo[a]pyrene diol epoxide-N2-guanine adduct in DNA from a minor groove alignment to intercalation with base displacement.
    Zhang N, Lin C, Huang X, Kolbanovskiy A, Hingerty BE, Amin S, Broyde S, Geacintov NE, Patel DJ.
    J Mol Biol; 2005 Mar 04; 346(4):951-65. PubMed ID: 15701509
    [Abstract] [Full Text] [Related]

  • 2. Solution conformation of the (-)-trans-anti-[BP]dG adduct opposite a deletion site in a DNA duplex: intercalation of the covalently attached benzo[a]pyrene into the helix with base displacement of the modified deoxyguanosine into the minor groove.
    Feng B, Gorin A, Kolbanovskiy A, Hingerty BE, Geacintov NE, Broyde S, Patel DJ.
    Biochemistry; 1997 Nov 11; 36(45):13780-90. PubMed ID: 9374854
    [Abstract] [Full Text] [Related]

  • 3. Conformational changes of a benzo[a]pyrene diol epoxide-N(2)-dG adduct induced by a 5'-flanking 5-methyl-substituted cytosine in a (Me)CG double-stranded oligonucleotide sequence context.
    Huang X, Colgate KC, Kolbanovskiy A, Amin S, Geacintov NE.
    Chem Res Toxicol; 2002 Mar 11; 15(3):438-44. PubMed ID: 11896693
    [Abstract] [Full Text] [Related]

  • 4. Molecular topology of polycyclic aromatic carcinogens determines DNA adduct conformation: a link to tumorigenic activity.
    Lin CH, Huang X, Kolbanovskii A, Hingerty BE, Amin S, Broyde S, Geacintov NE, Patel DJ.
    J Mol Biol; 2001 Mar 09; 306(5):1059-80. PubMed ID: 11237618
    [Abstract] [Full Text] [Related]

  • 5. Solution conformation of the (-)-cis-anti-benzo[a]pyrenyl-dG adduct opposite dC in a DNA duplex: intercalation of the covalently attached BP ring into the helix with base displacement of the modified deoxyguanosine into the major groove.
    Cosman M, Hingerty BE, Luneva N, Amin S, Geacintov NE, Broyde S, Patel DJ.
    Biochemistry; 1996 Jul 30; 35(30):9850-63. PubMed ID: 8703959
    [Abstract] [Full Text] [Related]

  • 6. Extending the understanding of mutagenicity: structural insights into primer-extension past a benzo[a]pyrene diol epoxide-DNA adduct.
    Perlow RA, Broyde S.
    J Mol Biol; 2003 Apr 04; 327(4):797-818. PubMed ID: 12654264
    [Abstract] [Full Text] [Related]

  • 7. Probing murine methyltransfease Dnmt3a interactions with benzo[a]pyrene-modified DNA by fluorescence methods.
    Minero AS, Lukashevich OV, Cherepanova NA, Kolbanovskiy A, Geacintov NE, Gromova ES.
    FEBS J; 2012 Oct 04; 279(20):3965-80. PubMed ID: 22913541
    [Abstract] [Full Text] [Related]

  • 8. Structural alignment of the (+)-trans-anti-benzo[a]pyrene-dG adduct positioned opposite dC at a DNA template-primer junction.
    Feng B, Gorin A, Hingerty BE, Geacintov NE, Broyde S, Patel DJ.
    Biochemistry; 1997 Nov 11; 36(45):13769-79. PubMed ID: 9374853
    [Abstract] [Full Text] [Related]

  • 9. Solution structure of the (+)-cis-anti-benzo[a]pyrene-dA ([BP]dA) adduct opposite dT in a DNA duplex.
    Mao B, Gu Z, Gorin A, Chen J, Hingerty BE, Amin S, Broyde S, Geacintov NE, Patel DJ.
    Biochemistry; 1999 Aug 17; 38(33):10831-42. PubMed ID: 10451380
    [Abstract] [Full Text] [Related]

  • 10. Solution conformation of the (+)-trans-anti-[BP]dG adduct opposite a deletion site in a DNA duplex: intercalation of the covalently attached benzo[a]pyrene into the helix with base displacement of the modified deoxyguanosine into the major groove.
    Cosman M, Fiala R, Hingerty BE, Amin S, Geacintov NE, Broyde S, Patel DJ.
    Biochemistry; 1994 Sep 27; 33(38):11507-17. PubMed ID: 7918364
    [Abstract] [Full Text] [Related]

  • 11. Solution conformation of the (+)-cis-anti-[BP]dG adduct opposite a deletion site in a DNA duplex: intercalation of the covalently attached benzo[a]pyrene into the helix with base displacement of the modified deoxyguanosine into the minor groove.
    Cosman M, Fiala R, Hingerty BE, Amin S, Geacintov NE, Broyde S, Patel DJ.
    Biochemistry; 1994 Sep 27; 33(38):11518-27. PubMed ID: 7918365
    [Abstract] [Full Text] [Related]

  • 12. DNA adducts from a tumorigenic metabolite of benzo[a]pyrene block human RNA polymerase II elongation in a sequence- and stereochemistry-dependent manner.
    Perlow RA, Kolbanovskii A, Hingerty BE, Geacintov NE, Broyde S, Scicchitano DA.
    J Mol Biol; 2002 Aug 02; 321(1):29-47. PubMed ID: 12139931
    [Abstract] [Full Text] [Related]

  • 13. Structural characterization of a (+)-trans-anti-benzo[a]pyrene-DNA adduct using NMR, restrained energy minimization, and molecular dynamics.
    Fountain MA, Krugh TR.
    Biochemistry; 1995 Mar 14; 34(10):3152-61. PubMed ID: 7880810
    [Abstract] [Full Text] [Related]

  • 14. Origins of conformational differences between cis and trans DNA adducts derived from enantiomeric anti-benzo[a]pyrene diol epoxides.
    Xie XM, Geacintov NE, Broyde S.
    Chem Res Toxicol; 1999 Jul 14; 12(7):597-609. PubMed ID: 10409399
    [Abstract] [Full Text] [Related]

  • 15. Evading the proofreading machinery of a replicative DNA polymerase: induction of a mutation by an environmental carcinogen.
    Perlow RA, Broyde S.
    J Mol Biol; 2001 Jun 01; 309(2):519-36. PubMed ID: 11371169
    [Abstract] [Full Text] [Related]

  • 16. Structural alignments of (+)- and (-)-trans-anti-benzo[a]pyrene-dG adducts positioned at a DNA template-primer junction.
    Cosman M, Hingerty BE, Geacintov NE, Broyde S, Patel DJ.
    Biochemistry; 1995 Nov 21; 34(46):15334-50. PubMed ID: 7578150
    [Abstract] [Full Text] [Related]

  • 17. The influence of cytosine methylation on the chemoselectivity of benzo[a]pyrene diol epoxide-oligonucleotide adducts determined using nanoLC/MS/MS.
    Glick J, Xiong W, Lin Y, Noronha AM, Wilds CJ, Vouros P.
    J Mass Spectrom; 2009 Aug 21; 44(8):1241-8. PubMed ID: 19536795
    [Abstract] [Full Text] [Related]

  • 18. Exocyclic amino groups of flanking guanines govern sequence-dependent adduct conformations and local structural distortions for minor groove-aligned benzo[a]pyrenyl-guanine lesions in a GG mutation hotspot context.
    Rodríguez FA, Cai Y, Lin C, Tang Y, Kolbanovskiy A, Amin S, Patel DJ, Broyde S, Geacintov NE.
    Nucleic Acids Res; 2007 Aug 21; 35(5):1555-68. PubMed ID: 17287290
    [Abstract] [Full Text] [Related]

  • 19. Nuclear magnetic resonance studies of an N2-guanine adduct derived from the tumorigen dibenzo[a,l]pyrene in DNA: impact of adduct stereochemistry, size, and local DNA sequence on solution conformations.
    Rodríguez FA, Liu Z, Lin CH, Ding S, Cai Y, Kolbanovskiy A, Kolbanovskiy M, Amin S, Broyde S, Geacintov NE.
    Biochemistry; 2014 Mar 25; 53(11):1827-41. PubMed ID: 24617538
    [Abstract] [Full Text] [Related]

  • 20. Stereochemical origin of opposite orientations in DNA adducts derived from enantiomeric anti-benzo[a]pyrene diol epoxides with different tumorigenic potentials.
    Xie XM, Geacintov NE, Broyde S.
    Biochemistry; 1999 Mar 09; 38(10):2956-68. PubMed ID: 10074348
    [Abstract] [Full Text] [Related]

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