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Journal Abstract Search

339 related items for PubMed ID: 15728117

  • 1.
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  • 2. A profile-based deterministic sequential Monte Carlo algorithm for motif discovery.
    Liang KC, Wang X, Anastassiou D.
    Bioinformatics; 2008 Jan 01; 24(1):46-55. PubMed ID: 18024972
    [Abstract] [Full Text] [Related]

  • 3. MUSA: a parameter free algorithm for the identification of biologically significant motifs.
    Mendes ND, Casimiro AC, Santos PM, Sá-Correia I, Oliveira AL, Freitas AT.
    Bioinformatics; 2006 Dec 15; 22(24):2996-3002. PubMed ID: 17068086
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  • 5. Identification of co-regulated genes through Bayesian clustering of predicted regulatory binding sites.
    Qin ZS, McCue LA, Thompson W, Mayerhofer L, Lawrence CE, Liu JS.
    Nat Biotechnol; 2003 Apr 15; 21(4):435-9. PubMed ID: 12627170
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  • 6. SPACER: identification of cis-regulatory elements with non-contiguous critical residues.
    Chakravarty A, Carlson JM, Khetani RS, DeZiel CE, Gross RH.
    Bioinformatics; 2007 Apr 15; 23(8):1029-31. PubMed ID: 17470480
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  • 8. Gibbs motif sampling: detection of bacterial outer membrane protein repeats.
    Neuwald AF, Liu JS, Lawrence CE.
    Protein Sci; 1995 Aug 15; 4(8):1618-32. PubMed ID: 8520488
    [Abstract] [Full Text] [Related]

  • 9. Informative priors based on transcription factor structural class improve de novo motif discovery.
    Narlikar L, Gordân R, Ohler U, Hartemink AJ.
    Bioinformatics; 2006 Jul 15; 22(14):e384-92. PubMed ID: 16873497
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  • 12. MotifCut: regulatory motifs finding with maximum density subgraphs.
    Fratkin E, Naughton BT, Brutlag DL, Batzoglou S.
    Bioinformatics; 2006 Jul 15; 22(14):e150-7. PubMed ID: 16873465
    [Abstract] [Full Text] [Related]

  • 13. BioOptimizer: a Bayesian scoring function approach to motif discovery.
    Jensen ST, Liu JS.
    Bioinformatics; 2004 Jul 10; 20(10):1557-64. PubMed ID: 14962923
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  • 15. Mining frequent stem patterns from unaligned RNA sequences.
    Hamada M, Tsuda K, Kudo T, Kin T, Asai K.
    Bioinformatics; 2006 Oct 15; 22(20):2480-7. PubMed ID: 16908501
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  • 20. Identification of sequence motifs significantly associated with antisense activity.
    McQuisten KA, Peek AS.
    BMC Bioinformatics; 2007 Jun 07; 8():184. PubMed ID: 17555590
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