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Journal Abstract Search

208 related items for PubMed ID: 15755812

  • 1. Identification of transcribed sequences in Arabidopsis thaliana by using high-resolution genome tiling arrays.
    Stolc V, Samanta MP, Tongprasit W, Sethi H, Liang S, Nelson DC, Hegeman A, Nelson C, Rancour D, Bednarek S, Ulrich EL, Zhao Q, Wrobel RL, Newman CS, Fox BG, Phillips GN, Markley JL, Sussman MR.
    Proc Natl Acad Sci U S A; 2005 Mar 22; 102(12):4453-8. PubMed ID: 15755812
    [Abstract] [Full Text] [Related]

  • 2. Support vector machines-based identification of alternative splicing in Arabidopsis thaliana from whole-genome tiling arrays.
    Eichner J, Zeller G, Laubinger S, Rätsch G.
    BMC Bioinformatics; 2011 Feb 16; 12():55. PubMed ID: 21324185
    [Abstract] [Full Text] [Related]

  • 3. Global identification of human transcribed sequences with genome tiling arrays.
    Bertone P, Stolc V, Royce TE, Rozowsky JS, Urban AE, Zhu X, Rinn JL, Tongprasit W, Samanta M, Weissman S, Gerstein M, Snyder M.
    Science; 2004 Dec 24; 306(5705):2242-6. PubMed ID: 15539566
    [Abstract] [Full Text] [Related]

  • 4. Analysis of antisense expression by whole genome tiling microarrays and siRNAs suggests mis-annotation of Arabidopsis orphan protein-coding genes.
    Richardson CR, Luo QJ, Gontcharova V, Jiang YW, Samanta M, Youn E, Rock CD.
    PLoS One; 2010 May 26; 5(5):e10710. PubMed ID: 20520764
    [Abstract] [Full Text] [Related]

  • 5. Transcript profiling in Arabidopsis with genome tiling microarrays.
    Coman D, Gruissem W, Hennig L.
    Methods Mol Biol; 2013 May 26; 1067():35-49. PubMed ID: 23975784
    [Abstract] [Full Text] [Related]

  • 6. Empirical analysis of transcriptional activity in the Arabidopsis genome.
    Yamada K, Lim J, Dale JM, Chen H, Shinn P, Palm CJ, Southwick AM, Wu HC, Kim C, Nguyen M, Pham P, Cheuk R, Karlin-Newmann G, Liu SX, Lam B, Sakano H, Wu T, Yu G, Miranda M, Quach HL, Tripp M, Chang CH, Lee JM, Toriumi M, Chan MM, Tang CC, Onodera CS, Deng JM, Akiyama K, Ansari Y, Arakawa T, Banh J, Banno F, Bowser L, Brooks S, Carninci P, Chao Q, Choy N, Enju A, Goldsmith AD, Gurjal M, Hansen NF, Hayashizaki Y, Johnson-Hopson C, Hsuan VW, Iida K, Karnes M, Khan S, Koesema E, Ishida J, Jiang PX, Jones T, Kawai J, Kamiya A, Meyers C, Nakajima M, Narusaka M, Seki M, Sakurai T, Satou M, Tamse R, Vaysberg M, Wallender EK, Wong C, Yamamura Y, Yuan S, Shinozaki K, Davis RW, Theologis A, Ecker JR.
    Science; 2003 Oct 31; 302(5646):842-6. PubMed ID: 14593172
    [Abstract] [Full Text] [Related]

  • 7. Quantitative RNA expression analysis with Affymetrix Tiling 1.0R arrays identifies new E2F target genes.
    Naouar N, Vandepoele K, Lammens T, Casneuf T, Zeller G, van Hummelen P, Weigel D, Rätsch G, Inzé D, Kuiper M, De Veylder L, Vuylsteke M.
    Plant J; 2009 Jan 31; 57(1):184-94. PubMed ID: 18764924
    [Abstract] [Full Text] [Related]

  • 8. Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis.
    Czechowski T, Stitt M, Altmann T, Udvardi MK, Scheible WR.
    Plant Physiol; 2005 Sep 31; 139(1):5-17. PubMed ID: 16166256
    [Abstract] [Full Text] [Related]

  • 9. Whole-genome microarray in Arabidopsis facilitates global analysis of retained introns.
    Ner-Gaon H, Fluhr R.
    DNA Res; 2006 Jun 30; 13(3):111-21. PubMed ID: 16980712
    [Abstract] [Full Text] [Related]

  • 10. Analysis of gene expression in Arabidopsis thaliana by array hybridization with genomic DNA fragments aligned along chromosomal regions.
    Hanano S, Amagai M, Kaneko T, Kuwata C, Tsugane T, Sakurai N, Nakamura Y, Shibata D, Tabata S.
    Plant J; 2002 Apr 30; 30(2):247-55. PubMed ID: 12000460
    [Abstract] [Full Text] [Related]

  • 11. Stress-induced changes in the Arabidopsis thaliana transcriptome analyzed using whole-genome tiling arrays.
    Zeller G, Henz SR, Widmer CK, Sachsenberg T, Rätsch G, Weigel D, Laubinger S.
    Plant J; 2009 Jun 30; 58(6):1068-82. PubMed ID: 19222804
    [Abstract] [Full Text] [Related]

  • 12. Features of Arabidopsis genes and genome discovered using full-length cDNAs.
    Alexandrov NN, Troukhan ME, Brover VV, Tatarinova T, Flavell RB, Feldmann KA.
    Plant Mol Biol; 2006 Jan 30; 60(1):69-85. PubMed ID: 16463100
    [Abstract] [Full Text] [Related]

  • 13. Strand-specific transcriptome profiling with directly labeled RNA on genomic tiling microarrays.
    Yu WH, Høvik H, Olsen I, Chen T.
    BMC Mol Biol; 2011 Jan 14; 12():3. PubMed ID: 21235785
    [Abstract] [Full Text] [Related]

  • 14. Genome-wide identification of long noncoding natural antisense transcripts and their responses to light in Arabidopsis.
    Wang H, Chung PJ, Liu J, Jang IC, Kean MJ, Xu J, Chua NH.
    Genome Res; 2014 Mar 14; 24(3):444-53. PubMed ID: 24402519
    [Abstract] [Full Text] [Related]

  • 15. Integrated detection of natural antisense transcripts using strand-specific RNA sequencing data.
    Li S, Liberman LM, Mukherjee N, Benfey PN, Ohler U.
    Genome Res; 2013 Oct 14; 23(10):1730-9. PubMed ID: 23816784
    [Abstract] [Full Text] [Related]

  • 16. The Arabidopsis thaliana ACT4/ACT12 actin gene subclass is strongly expressed throughout pollen development.
    Huang S, An YQ, McDowell JM, McKinney EC, Meagher RB.
    Plant J; 1996 Aug 14; 10(2):189-202. PubMed ID: 8771777
    [Abstract] [Full Text] [Related]

  • 17. Assembly of a gene sequence tag microarray by reversible biotin-streptavidin capture for transcript analysis of Arabidopsis thaliana.
    Wirta V, Holmberg A, Lukacs M, Nilsson P, Hilson P, Uhlén M, Bhalerao RP, Lundeberg J.
    BMC Biotechnol; 2005 Feb 03; 5():5. PubMed ID: 15689241
    [Abstract] [Full Text] [Related]

  • 18. Bicistronic and fused monocistronic transcripts are derived from adjacent loci in the Arabidopsis genome.
    Thimmapuram J, Duan H, Liu L, Schuler MA.
    RNA; 2005 Feb 03; 11(2):128-38. PubMed ID: 15659355
    [Abstract] [Full Text] [Related]

  • 19. The nuclear-encoded factor HCF173 is involved in the initiation of translation of the psbA mRNA in Arabidopsis thaliana.
    Schult K, Meierhoff K, Paradies S, Töller T, Wolff P, Westhoff P.
    Plant Cell; 2007 Apr 03; 19(4):1329-46. PubMed ID: 17435084
    [Abstract] [Full Text] [Related]

  • 20. Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.
    Cheng CY, Krishnakumar V, Chan AP, Thibaud-Nissen F, Schobel S, Town CD.
    Plant J; 2017 Feb 03; 89(4):789-804. PubMed ID: 27862469
    [Abstract] [Full Text] [Related]

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