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Journal Abstract Search

283 related items for PubMed ID: 15817687

  • 1. pFind: a novel database-searching software system for automated peptide and protein identification via tandem mass spectrometry.
    Li D, Fu Y, Sun R, Ling CX, Wei Y, Zhou H, Zeng R, Yang Q, He S, Gao W.
    Bioinformatics; 2005 Jul 01; 21(13):3049-50. PubMed ID: 15817687
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  • 5. PepSplice: cache-efficient search algorithms for comprehensive identification of tandem mass spectra.
    Roos FF, Jacob R, Grossmann J, Fischer B, Buhmann JM, Gruissem W, Baginsky S, Widmayer P.
    Bioinformatics; 2007 Nov 15; 23(22):3016-23. PubMed ID: 17768164
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  • 6. IndexToolkit: an open source toolbox to index protein databases for high-throughput proteomics.
    Li D, Gao W, Ling CX, Wang X, Sun R, He S.
    Bioinformatics; 2006 Oct 15; 22(20):2572-3. PubMed ID: 16945944
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  • 10. MSDash: mass spectrometry database and search.
    Wu Z, Lajoie G, Ma B.
    Comput Syst Bioinformatics Conf; 2008 Oct 15; 7():63-71. PubMed ID: 19642269
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  • 12. Speeding up tandem mass spectrometry based database searching by peptide and spectrum indexing.
    Li Y, Chi H, Wang LH, Wang HP, Fu Y, Yuan ZF, Li SJ, Liu YS, Sun RX, Zeng R, He SM.
    Rapid Commun Mass Spectrom; 2010 Mar 15; 24(6):807-14. PubMed ID: 20187083
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  • 13. Parmodel: a web server for automated comparative modeling of proteins.
    Uchôa HB, Jorge GE, Freitas Da Silveira NJ, Camera JC, Canduri F, De Azevedo WF.
    Biochem Biophys Res Commun; 2004 Dec 24; 325(4):1481-6. PubMed ID: 15555595
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  • 14. Fast tandem mass spectra-based protein identification regardless of the number of spectra or potential modifications examined.
    Falkner J, Andrews P.
    Bioinformatics; 2005 May 15; 21(10):2177-84. PubMed ID: 15746284
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  • 15. Intensity-based protein identification by machine learning from a library of tandem mass spectra.
    Elias JE, Gibbons FD, King OD, Roth FP, Gygi SP.
    Nat Biotechnol; 2004 Feb 15; 22(2):214-9. PubMed ID: 14730315
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  • 18. Dasty and UniProt DAS: a perfect pair for protein feature visualization.
    Jones P, Vinod N, Down T, Hackmann A, Kahari A, Kretschmann E, Quinn A, Wieser D, Hermjakob H, Apweiler R.
    Bioinformatics; 2005 Jul 15; 21(14):3198-9. PubMed ID: 15905273
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  • 19. Searching sequence databases via de novo peptide sequencing by tandem mass spectrometry.
    Johnson RS, Taylor JA.
    Mol Biotechnol; 2002 Nov 15; 22(3):301-15. PubMed ID: 12448884
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  • 20. ProteomeCommons.org JAF: reference information and tools for proteomics.
    Falkner JA, Falkner JW, Andrews PC.
    Bioinformatics; 2006 Mar 01; 22(5):632-3. PubMed ID: 16434446
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