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Journal Abstract Search

380 related items for PubMed ID: 15955238

  • 1. Evaluation of the similarity of gene expression data estimated with SAGE and Affymetrix GeneChips.
    van Ruissen F, Ruijter JM, Schaaf GJ, Asgharnegad L, Zwijnenburg DA, Kool M, Baas F.
    BMC Genomics; 2005 Jun 14; 6():91. PubMed ID: 15955238
    [Abstract] [Full Text] [Related]

  • 2. Scaling of gene expression data allowing the comparison of different gene expression platforms.
    van Ruissen F, Schaaf GJ, Kool M, Baas F, Ruijter JM.
    Methods Mol Biol; 2008 Jun 14; 387():169-83. PubMed ID: 18287631
    [Abstract] [Full Text] [Related]

  • 3. Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in cancer-associated gene expression measurements.
    Carter SL, Eklund AC, Mecham BH, Kohane IS, Szallasi Z.
    BMC Bioinformatics; 2005 Apr 25; 6():107. PubMed ID: 15850491
    [Abstract] [Full Text] [Related]

  • 4. Statistical analysis of an RNA titration series evaluates microarray precision and sensitivity on a whole-array basis.
    Holloway AJ, Oshlack A, Diyagama DS, Bowtell DD, Smyth GK.
    BMC Bioinformatics; 2006 Nov 22; 7():511. PubMed ID: 17118209
    [Abstract] [Full Text] [Related]

  • 5. Performance evaluation of commercial short-oligonucleotide microarrays and the impact of noise in making cross-platform correlations.
    Shippy R, Sendera TJ, Lockner R, Palaniappan C, Kaysser-Kranich T, Watts G, Alsobrook J.
    BMC Genomics; 2004 Sep 02; 5():61. PubMed ID: 15345031
    [Abstract] [Full Text] [Related]

  • 6. Cross platform microarray analysis for robust identification of differentially expressed genes.
    Bosotti R, Locatelli G, Healy S, Scacheri E, Sartori L, Mercurio C, Calogero R, Isacchi A.
    BMC Bioinformatics; 2007 Mar 08; 8 Suppl 1(Suppl 1):S5. PubMed ID: 17430572
    [Abstract] [Full Text] [Related]

  • 7. [Transcriptomes for serial analysis of gene expression].
    Marti J, Piquemal D, Manchon L, Commes T.
    J Soc Biol; 2002 Mar 08; 196(4):303-7. PubMed ID: 12645300
    [Abstract] [Full Text] [Related]

  • 8. Long versus short oligonucleotide microarrays for the study of gene expression in nonhuman primates.
    Walker SJ, Wang Y, Grant KA, Chan F, Hellmann GM.
    J Neurosci Methods; 2006 Apr 15; 152(1-2):179-89. PubMed ID: 16253343
    [Abstract] [Full Text] [Related]

  • 9. Sequence-matched probes produce increased cross-platform consistency and more reproducible biological results in microarray-based gene expression measurements.
    Mecham BH, Klus GT, Strovel J, Augustus M, Byrne D, Bozso P, Wetmore DZ, Mariani TJ, Kohane IS, Szallasi Z.
    Nucleic Acids Res; 2004 May 25; 32(9):e74. PubMed ID: 15161944
    [Abstract] [Full Text] [Related]

  • 10. Gene expression and isoform variation analysis using Affymetrix Exon Arrays.
    Bemmo A, Benovoy D, Kwan T, Gaffney DJ, Jensen RV, Majewski J.
    BMC Genomics; 2008 Nov 07; 9():529. PubMed ID: 18990248
    [Abstract] [Full Text] [Related]

  • 11. Uncovering information on expression of natural antisense transcripts in Affymetrix MOE430 datasets.
    Oeder S, Mages J, Flicek P, Lang R.
    BMC Genomics; 2007 Jun 28; 8():200. PubMed ID: 17598913
    [Abstract] [Full Text] [Related]

  • 12. Comparison of oligonucleotide-microarray and serial analysis of gene expression (SAGE) in transcript profiling analysis of megakaryocytes derived from CD34+ cells.
    Kim HL.
    Exp Mol Med; 2003 Oct 31; 35(5):460-6. PubMed ID: 14646601
    [Abstract] [Full Text] [Related]

  • 13. Design and evaluation of Actichip, a thematic microarray for the study of the actin cytoskeleton.
    Muller J, Mehlen A, Vetter G, Yatskou M, Muller A, Chalmel F, Poch O, Friederich E, Vallar L.
    BMC Genomics; 2007 Aug 29; 8():294. PubMed ID: 17727702
    [Abstract] [Full Text] [Related]

  • 14. Experimental comparison and cross-validation of the Affymetrix and Illumina gene expression analysis platforms.
    Barnes M, Freudenberg J, Thompson S, Aronow B, Pavlidis P.
    Nucleic Acids Res; 2005 Aug 29; 33(18):5914-23. PubMed ID: 16237126
    [Abstract] [Full Text] [Related]

  • 15. Comparison of the latest commercial short and long oligonucleotide microarray technologies.
    de Reyniès A, Geromin D, Cayuela JM, Petel F, Dessen P, Sigaux F, Rickman DS.
    BMC Genomics; 2006 Mar 15; 7():51. PubMed ID: 16539734
    [Abstract] [Full Text] [Related]

  • 16. A sequence-oriented comparison of gene expression measurements across different hybridization-based technologies.
    Kuo WP, Liu F, Trimarchi J, Punzo C, Lombardi M, Sarang J, Whipple ME, Maysuria M, Serikawa K, Lee SY, McCrann D, Kang J, Shearstone JR, Burke J, Park DJ, Wang X, Rector TL, Ricciardi-Castagnoli P, Perrin S, Choi S, Bumgarner R, Kim JH, Short GF, Freeman MW, Seed B, Jensen R, Church GM, Hovig E, Cepko CL, Park P, Ohno-Machado L, Jenssen TK.
    Nat Biotechnol; 2006 Jul 15; 24(7):832-40. PubMed ID: 16823376
    [Abstract] [Full Text] [Related]

  • 17. Large scale real-time PCR validation on gene expression measurements from two commercial long-oligonucleotide microarrays.
    Wang Y, Barbacioru C, Hyland F, Xiao W, Hunkapiller KL, Blake J, Chan F, Gonzalez C, Zhang L, Samaha RR.
    BMC Genomics; 2006 Mar 21; 7():59. PubMed ID: 16551369
    [Abstract] [Full Text] [Related]

  • 18. Cross-species comparison of gene expression between human and porcine tissue, using single microarray platform--preliminary results.
    Shah G, Azizian M, Bruch D, Mehta R, Kittur D.
    Clin Transplant; 2004 Mar 21; 18 Suppl 12():76-80. PubMed ID: 15217413
    [Abstract] [Full Text] [Related]

  • 19. Too much data, but little inter-changeability: a lesson learned from mining public data on tissue specificity of gene expression.
    Li S, Li YH, Wei T, Su EW, Duffin K, Liao B.
    Biol Direct; 2006 Oct 25; 1():33. PubMed ID: 17064414
    [Abstract] [Full Text] [Related]

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