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Journal Abstract Search

197 related items for PubMed ID: 15980484

  • 1. SiteEngines: recognition and comparison of binding sites and protein-protein interfaces.
    Shulman-Peleg A, Nussinov R, Wolfson HJ.
    Nucleic Acids Res; 2005 Jul 01; 33(Web Server issue):W337-41. PubMed ID: 15980484
    [Abstract] [Full Text] [Related]

  • 2. Generation and analysis of a protein-protein interface data set with similar chemical and spatial patterns of interactions.
    Mintz S, Shulman-Peleg A, Wolfson HJ, Nussinov R.
    Proteins; 2005 Oct 01; 61(1):6-20. PubMed ID: 16184518
    [Abstract] [Full Text] [Related]

  • 3. MultiBind and MAPPIS: webservers for multiple alignment of protein 3D-binding sites and their interactions.
    Shulman-Peleg A, Shatsky M, Nussinov R, Wolfson HJ.
    Nucleic Acids Res; 2008 Jul 01; 36(Web Server issue):W260-4. PubMed ID: 18467424
    [Abstract] [Full Text] [Related]

  • 4. PatchDock and SymmDock: servers for rigid and symmetric docking.
    Schneidman-Duhovny D, Inbar Y, Nussinov R, Wolfson HJ.
    Nucleic Acids Res; 2005 Jul 01; 33(Web Server issue):W363-7. PubMed ID: 15980490
    [Abstract] [Full Text] [Related]

  • 5. PreBI: prediction of biological interfaces of proteins in crystals.
    Tsuchiya Y, Kinoshita K, Ito N, Nakamura H.
    Nucleic Acids Res; 2006 Jul 01; 34(Web Server issue):W320-4. PubMed ID: 16844993
    [Abstract] [Full Text] [Related]

  • 6. SCOWLP: a web-based database for detailed characterization and visualization of protein interfaces.
    Teyra J, Doms A, Schroeder M, Pisabarro MT.
    BMC Bioinformatics; 2006 Mar 02; 7():104. PubMed ID: 16512892
    [Abstract] [Full Text] [Related]

  • 7. iPfam: visualization of protein-protein interactions in PDB at domain and amino acid resolutions.
    Finn RD, Marshall M, Bateman A.
    Bioinformatics; 2005 Feb 01; 21(3):410-2. PubMed ID: 15353450
    [Abstract] [Full Text] [Related]

  • 8. The SuMo server: 3D search for protein functional sites.
    Jambon M, Andrieu O, Combet C, Deléage G, Delfaud F, Geourjon C.
    Bioinformatics; 2005 Oct 15; 21(20):3929-30. PubMed ID: 16141250
    [Abstract] [Full Text] [Related]

  • 9. BioInfo3D: a suite of tools for structural bioinformatics.
    Shatsky M, Dror O, Schneidman-Duhovny D, Nussinov R, Wolfson HJ.
    Nucleic Acids Res; 2004 Jul 01; 32(Web Server issue):W503-7. PubMed ID: 15215437
    [Abstract] [Full Text] [Related]

  • 10. HotPoint: hot spot prediction server for protein interfaces.
    Tuncbag N, Keskin O, Gursoy A.
    Nucleic Acids Res; 2010 Jul 01; 38(Web Server issue):W402-6. PubMed ID: 20444871
    [Abstract] [Full Text] [Related]

  • 11. VoroMQA web server for assessing three-dimensional structures of proteins and protein complexes.
    Olechnovič K, Venclovas Č.
    Nucleic Acids Res; 2019 Jul 02; 47(W1):W437-W442. PubMed ID: 31073605
    [Abstract] [Full Text] [Related]

  • 12. MolLoc: a web tool for the local structural alignment of molecular surfaces.
    Angaran S, Bock ME, Garutti C, Guerra C.
    Nucleic Acids Res; 2009 Jul 02; 37(Web Server issue):W565-70. PubMed ID: 19465382
    [Abstract] [Full Text] [Related]

  • 13. PRISM: protein interactions by structural matching.
    Ogmen U, Keskin O, Aytuna AS, Nussinov R, Gursoy A.
    Nucleic Acids Res; 2005 Jul 01; 33(Web Server issue):W331-6. PubMed ID: 15991339
    [Abstract] [Full Text] [Related]

  • 14. ANCHOR: a web server and database for analysis of protein-protein interaction binding pockets for drug discovery.
    Meireles LM, Dömling AS, Camacho CJ.
    Nucleic Acids Res; 2010 Jul 01; 38(Web Server issue):W407-11. PubMed ID: 20525787
    [Abstract] [Full Text] [Related]

  • 15. PredUs: a web server for predicting protein interfaces using structural neighbors.
    Zhang QC, Deng L, Fisher M, Guan J, Honig B, Petrey D.
    Nucleic Acids Res; 2011 Jul 01; 39(Web Server issue):W283-7. PubMed ID: 21609948
    [Abstract] [Full Text] [Related]

  • 16. FiberDock: a web server for flexible induced-fit backbone refinement in molecular docking.
    Mashiach E, Nussinov R, Wolfson HJ.
    Nucleic Acids Res; 2010 Jul 01; 38(Web Server issue):W457-61. PubMed ID: 20460459
    [Abstract] [Full Text] [Related]

  • 17. PRISM: a web server and repository for prediction of protein-protein interactions and modeling their 3D complexes.
    Baspinar A, Cukuroglu E, Nussinov R, Keskin O, Gursoy A.
    Nucleic Acids Res; 2014 Jul 01; 42(Web Server issue):W285-9. PubMed ID: 24829450
    [Abstract] [Full Text] [Related]

  • 18. Specificity of molecular interactions in transient protein-protein interaction interfaces.
    Cho KI, Lee K, Lee KH, Kim D, Lee D.
    Proteins; 2006 Nov 15; 65(3):593-606. PubMed ID: 16948160
    [Abstract] [Full Text] [Related]

  • 19. A quantitative analysis of interfacial amino acid conservation in protein-protein hetero complexes.
    Reddy BV, Kaznessis YN.
    J Bioinform Comput Biol; 2005 Oct 15; 3(5):1137-50. PubMed ID: 16278951
    [Abstract] [Full Text] [Related]

  • 20. Fast and accurate modeling of protein-protein interactions by combining template-interface-based docking with flexible refinement.
    Tuncbag N, Keskin O, Nussinov R, Gursoy A.
    Proteins; 2012 Apr 15; 80(4):1239-49. PubMed ID: 22275112
    [Abstract] [Full Text] [Related]

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