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Journal Abstract Search

155 related items for PubMed ID: 16041675

  • 1. A novel strategy using MASCOT Distiller for analysis of cleavable isotope-coded affinity tag data to quantify protein changes in plasma.
    Leung KY, Lescuyer P, Campbell J, Byers HL, Allard L, Sanchez JC, Ward MA.
    Proteomics; 2005 Aug; 5(12):3040-4. PubMed ID: 16041675
    [Abstract] [Full Text] [Related]

  • 2. STEM: a software tool for large-scale proteomic data analyses.
    Shinkawa T, Taoka M, Yamauchi Y, Ichimura T, Kaji H, Takahashi N, Isobe T.
    J Proteome Res; 2005 Aug; 4(5):1826-31. PubMed ID: 16212438
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  • 4. Analytical characteristics of cleavable isotope-coded affinity tag-LC-tandem mass spectrometry for quantitative proteomic studies.
    Vaughn CP, Crockett DK, Lim MS, Elenitoba-Johnson KS.
    J Mol Diagn; 2006 Sep; 8(4):513-20. PubMed ID: 16931593
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  • 6. Centralized data analysis of a large interlaboratory proteomics project: a feasibility study.
    Beer I, Barnea E, Admon A.
    Proteomics; 2005 Aug; 5(13):3491-6. PubMed ID: 16052626
    [Abstract] [Full Text] [Related]

  • 7. An evaluation, comparison, and accurate benchmarking of several publicly available MS/MS search algorithms: sensitivity and specificity analysis.
    Kapp EA, Schütz F, Connolly LM, Chakel JA, Meza JE, Miller CA, Fenyo D, Eng JK, Adkins JN, Omenn GS, Simpson RJ.
    Proteomics; 2005 Aug; 5(13):3475-90. PubMed ID: 16047398
    [Abstract] [Full Text] [Related]

  • 8. Added value for tandem mass spectrometry shotgun proteomics data validation through isoelectric focusing of peptides.
    Heller M, Ye M, Michel PE, Morier P, Stalder D, Jünger MA, Aebersold R, Reymond F, Rossier JS.
    J Proteome Res; 2005 Aug; 4(6):2273-82. PubMed ID: 16335976
    [Abstract] [Full Text] [Related]

  • 9. A comparative evaluation of software for the analysis of liquid chromatography-tandem mass spectrometry data from isotope coded affinity tag experiments.
    Moulder R, Filén JJ, Salmi J, Katajamaa M, Nevalainen OS, Oresic M, Aittokallio T, Lahesmaa R, Nyman TA.
    Proteomics; 2005 Jul; 5(11):2748-60. PubMed ID: 15952233
    [Abstract] [Full Text] [Related]

  • 10. The human plasma proteome: analysis of Chinese serum using shotgun strategy.
    He P, He HZ, Dai J, Wang Y, Sheng QH, Zhou LP, Zhang ZS, Sun YL, Liu F, Wang K, Zhang JS, Wang HX, Song ZM, Zhang HR, Zeng R, Zhao X.
    Proteomics; 2005 Aug; 5(13):3442-53. PubMed ID: 16047309
    [Abstract] [Full Text] [Related]

  • 11. Bioinformatics challenges in mass spectrometry-driven proteomics.
    Martens L.
    Methods Mol Biol; 2011 Aug; 753():359-71. PubMed ID: 21604135
    [Abstract] [Full Text] [Related]

  • 12. Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database.
    Omenn GS, States DJ, Adamski M, Blackwell TW, Menon R, Hermjakob H, Apweiler R, Haab BB, Simpson RJ, Eddes JS, Kapp EA, Moritz RL, Chan DW, Rai AJ, Admon A, Aebersold R, Eng J, Hancock WS, Hefta SA, Meyer H, Paik YK, Yoo JS, Ping P, Pounds J, Adkins J, Qian X, Wang R, Wasinger V, Wu CY, Zhao X, Zeng R, Archakov A, Tsugita A, Beer I, Pandey A, Pisano M, Andrews P, Tammen H, Speicher DW, Hanash SM.
    Proteomics; 2005 Aug; 5(13):3226-45. PubMed ID: 16104056
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  • 13. Quantitative peptide and protein profiling by mass spectrometry.
    Schmidt A, Bisle B, Kislinger T.
    Methods Mol Biol; 2009 Aug; 492():21-38. PubMed ID: 19241025
    [Abstract] [Full Text] [Related]

  • 14. An iterative strategy for precursor ion selection for LC-MS/MS based shotgun proteomics.
    Zerck A, Nordhoff E, Resemann A, Mirgorodskaya E, Suckau D, Reinert K, Lehrach H, Gobom J.
    J Proteome Res; 2009 Jul; 8(7):3239-51. PubMed ID: 19402737
    [Abstract] [Full Text] [Related]

  • 15. Differentially isotope-coded N-terminal protein sulphonation: combining protein identification and quantification.
    Guillaume E, Panchaud A, Affolter M, Desvergnes V, Kussmann M.
    Proteomics; 2006 Apr; 6(8):2338-49. PubMed ID: 16526082
    [Abstract] [Full Text] [Related]

  • 16. Increased quantitative proteome coverage with (13)C/(12)C-based, acid-cleavable isotope-coded affinity tag reagent and modified data acquisition scheme.
    Yi EC, Li XJ, Cooke K, Lee H, Raught B, Page A, Aneliunas V, Hieter P, Goodlett DR, Aebersold R.
    Proteomics; 2005 Feb; 5(2):380-7. PubMed ID: 15648049
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  • 18. Algorithms and tools for analysis and management of mass spectrometry data.
    Veltri P.
    Brief Bioinform; 2008 Mar; 9(2):144-55. PubMed ID: 18356204
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  • 19. Human Plasma PeptideAtlas.
    Deutsch EW, Eng JK, Zhang H, King NL, Nesvizhskii AI, Lin B, Lee H, Yi EC, Ossola R, Aebersold R.
    Proteomics; 2005 Aug; 5(13):3497-500. PubMed ID: 16052627
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  • 20. Peptidomic analysis of human blood specimens: comparison between plasma specimens and serum by differential peptide display.
    Tammen H, Schulte I, Hess R, Menzel C, Kellmann M, Mohring T, Schulz-Knappe P.
    Proteomics; 2005 Aug; 5(13):3414-22. PubMed ID: 16038021
    [Abstract] [Full Text] [Related]

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