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Journal Abstract Search

261 related items for PubMed ID: 16135709

  • 1. PRECISE: software for prediction of cis-acting regulatory elements.
    Trindade LM, van Berloo R, Fiers M, Visser RG.
    J Hered; 2005; 96(5):618-22. PubMed ID: 16135709
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  • 3. Genome-wide prediction of transcriptional regulatory elements of human promoters using gene expression and promoter analysis data.
    Kim SY, Kim Y.
    BMC Bioinformatics; 2006 Jul 04; 7():330. PubMed ID: 16817975
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  • 4. A universal algorithm for genome-wide in silicio identification of biologically significant gene promoter putative cis-regulatory-elements; identification of new elements for reactive oxygen species and sucrose signaling in Arabidopsis.
    Geisler M, Kleczkowski LA, Karpinski S.
    Plant J; 2006 Feb 04; 45(3):384-98. PubMed ID: 16412085
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  • 5. Motif detection in Arabidopsis: correlation with gene expression data.
    Janaki C, Joshi RR.
    In Silico Biol; 2004 Feb 04; 4(2):149-61. PubMed ID: 15107020
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  • 9. Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae.
    Hughes JD, Estep PW, Tavazoie S, Church GM.
    J Mol Biol; 2000 Mar 10; 296(5):1205-14. PubMed ID: 10698627
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  • 10. Computational discovery of DNA motifs associated with cell type-specific gene expression in Ciona.
    Kusakabe T, Yoshida R, Ikeda Y, Tsuda M.
    Dev Biol; 2004 Dec 15; 276(2):563-80. PubMed ID: 15581886
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  • 11. In Silico analysis of the lateral organ junction (LOJ) gene and promoter of Arabidopsis thaliana.
    Saha D, Prasad AM, Sujatha TP, Kumar V, Jain PK, Bhat SR, Srinivasan R.
    In Silico Biol; 2007 Dec 15; 7(1):7-19. PubMed ID: 17688431
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  • 12. Analysis of differentially-regulated genes within a regulatory network by GPS genome navigation.
    Zwir I, Huang H, Groisman EA.
    Bioinformatics; 2005 Nov 15; 21(22):4073-83. PubMed ID: 16159917
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  • 13. Identification of putative cis-regulatory elements in Cryptosporidium parvum by de novo pattern finding.
    Mullapudi N, Lancto CA, Abrahamsen MS, Kissinger JC.
    BMC Genomics; 2007 Jan 09; 8():13. PubMed ID: 17212834
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  • 15. MoD Tools: regulatory motif discovery in nucleotide sequences from co-regulated or homologous genes.
    Pavesi G, Mereghetti P, Zambelli F, Stefani M, Mauri G, Pesole G.
    Nucleic Acids Res; 2006 Jul 01; 34(Web Server issue):W566-70. PubMed ID: 16845071
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  • 17. CREME: Cis-Regulatory Module Explorer for the human genome.
    Sharan R, Ben-Hur A, Loots GG, Ovcharenko I.
    Nucleic Acids Res; 2004 Jul 01; 32(Web Server issue):W253-6. PubMed ID: 15215390
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  • 18. Human polyomavirus JCV late leader peptide region contains important regulatory elements.
    Akan I, Sariyer IK, Biffi R, Palermo V, Woolridge S, White MK, Amini S, Khalili K, Safak M.
    Virology; 2006 May 25; 349(1):66-78. PubMed ID: 16497349
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