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Journal Abstract Search


198 related items for PubMed ID: 16155119

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  • 3. Molecular dynamics simulations of peptides and proteins with a continuum electrostatic model based on screened Coulomb potentials.
    Hassan SA, Mehler EL, Zhang D, Weinstein H.
    Proteins; 2003 Apr 01; 51(1):109-25. PubMed ID: 12596268
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  • 4. One nanosecond molecular dynamics simulation of the N-terminal domain of the lambda repressor protein.
    Kombo DC, Young MA, Beveridge DL.
    Biopolymers; 2000 Jun 01; 53(7):596-605. PubMed ID: 10766954
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  • 5. A method to configure protein side-chains from the main-chain trace in homology modelling.
    Eisenmenger F, Argos P, Abagyan R.
    J Mol Biol; 1993 Jun 05; 231(3):849-60. PubMed ID: 8515455
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  • 6. SPINFAST: using structure alignment profiles to enhance the accuracy and assess the reliability of protein side-chain modeling.
    Poleksic A, Danzer JF, Palmer BA, Olafson BD, Debe DA.
    Proteins; 2006 Dec 01; 65(4):953-8. PubMed ID: 17006949
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  • 10. Structural mining: self-consistent design on flexible protein-peptide docking and transferable binding affinity potential.
    Liu Z, Dominy BN, Shakhnovich EI.
    J Am Chem Soc; 2004 Jul 14; 126(27):8515-28. PubMed ID: 15238009
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  • 11. Side-chain and backbone flexibility in protein core design.
    Desjarlais JR, Handel TM.
    J Mol Biol; 1999 Jul 02; 290(1):305-18. PubMed ID: 10388574
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  • 15. Reversible scaling of dihedral angle barriers during molecular dynamics to improve structure prediction of cyclic peptides.
    Riemann RN, Zacharias M.
    J Pept Res; 2004 Apr 02; 63(4):354-64. PubMed ID: 15102053
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  • 16. The energetics of off-rotamer protein side-chain conformations.
    Petrella RJ, Karplus M.
    J Mol Biol; 2001 Oct 05; 312(5):1161-75. PubMed ID: 11580256
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