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Journal Abstract Search

182 related items for PubMed ID: 16284939

  • 1. Automated protein identification by tandem mass spectrometry: issues and strategies.
    Hernandez P, Müller M, Appel RD.
    Mass Spectrom Rev; 2006; 25(2):235-54. PubMed ID: 16284939
    [Abstract] [Full Text] [Related]

  • 2. VEMS 3.0: algorithms and computational tools for tandem mass spectrometry based identification of post-translational modifications in proteins.
    Matthiesen R, Trelle MB, Højrup P, Bunkenborg J, Jensen ON.
    J Proteome Res; 2005; 4(6):2338-47. PubMed ID: 16335983
    [Abstract] [Full Text] [Related]

  • 3. Algorithms and tools for analysis and management of mass spectrometry data.
    Veltri P.
    Brief Bioinform; 2008 Mar; 9(2):144-55. PubMed ID: 18356204
    [Abstract] [Full Text] [Related]

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  • 5. CHOMPER: a bioinformatic tool for rapid validation of tandem mass spectrometry search results associated with high-throughput proteomic strategies.
    Eddes JS, Kapp EA, Frecklington DF, Connolly LM, Layton MJ, Moritz RL, Simpson RJ.
    Proteomics; 2002 Sep; 2(9):1097-103. PubMed ID: 12362328
    [Abstract] [Full Text] [Related]

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  • 7. Bioinformatics methods for protein identification using Peptide mass fingerprinting.
    Song Z, Chen L, Xu D.
    Methods Mol Biol; 2010 Sep; 604():7-22. PubMed ID: 20013361
    [Abstract] [Full Text] [Related]

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  • 9. Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database.
    Omenn GS, States DJ, Adamski M, Blackwell TW, Menon R, Hermjakob H, Apweiler R, Haab BB, Simpson RJ, Eddes JS, Kapp EA, Moritz RL, Chan DW, Rai AJ, Admon A, Aebersold R, Eng J, Hancock WS, Hefta SA, Meyer H, Paik YK, Yoo JS, Ping P, Pounds J, Adkins J, Qian X, Wang R, Wasinger V, Wu CY, Zhao X, Zeng R, Archakov A, Tsugita A, Beer I, Pandey A, Pisano M, Andrews P, Tammen H, Speicher DW, Hanash SM.
    Proteomics; 2005 Aug; 5(13):3226-45. PubMed ID: 16104056
    [Abstract] [Full Text] [Related]

  • 10. Filtering strategies for improving protein identification in high-throughput MS/MS studies.
    Salmi J, Nyman TA, Nevalainen OS, Aittokallio T.
    Proteomics; 2009 Feb; 9(4):848-60. PubMed ID: 19160393
    [Abstract] [Full Text] [Related]

  • 11. Comprehensive mass spectrometric analysis of the 20S proteasome complex.
    Huang L, Burlingame AL.
    Methods Enzymol; 2005 Feb; 405():187-236. PubMed ID: 16413316
    [Abstract] [Full Text] [Related]

  • 12. Exploring the precursor ion exclusion feature of liquid chromatography-electrospray ionization quadrupole time-of-flight mass spectrometry for improving protein identification in shotgun proteome analysis.
    Wang N, Li L.
    Anal Chem; 2008 Jun 15; 80(12):4696-710. PubMed ID: 18479145
    [Abstract] [Full Text] [Related]

  • 13. SwissPIT: An workflow-based platform for analyzing tandem-MS spectra using the Grid.
    Quandt A, Masselot A, Hernandez P, Hernandez C, Maffioletti S, Appel RD, Lisacek F.
    Proteomics; 2009 May 15; 9(10):2648-55. PubMed ID: 19391179
    [Abstract] [Full Text] [Related]

  • 14. Added value for tandem mass spectrometry shotgun proteomics data validation through isoelectric focusing of peptides.
    Heller M, Ye M, Michel PE, Morier P, Stalder D, Jünger MA, Aebersold R, Reymond F, Rossier JS.
    J Proteome Res; 2005 May 15; 4(6):2273-82. PubMed ID: 16335976
    [Abstract] [Full Text] [Related]

  • 15. Grid-based analysis of tandem mass spectrometry data in clinical proteomics.
    Quandt A, Hernandez P, Kunzst P, Pautasso C, Tuloup M, Hernandez C, Appel RD.
    Stud Health Technol Inform; 2007 May 15; 126():13-22. PubMed ID: 17476043
    [Abstract] [Full Text] [Related]

  • 16. Large-scale identification and quantification of covalent modifications in therapeutic proteins.
    Zhang Z.
    Anal Chem; 2009 Oct 15; 81(20):8354-64. PubMed ID: 19764700
    [Abstract] [Full Text] [Related]

  • 17. Analysis of mass spectrometry data in proteomics.
    Matthiesen R, Jensen ON.
    Methods Mol Biol; 2008 Oct 15; 453():105-22. PubMed ID: 18712299
    [Abstract] [Full Text] [Related]

  • 18. Approaches towards the automated interpretation and prediction of electrospray tandem mass spectra of non-peptidic combinatorial compounds.
    Klagkou K, Pullen F, Harrison M, Organ A, Firth A, Langley GJ.
    Rapid Commun Mass Spectrom; 2003 Oct 15; 17(11):1163-8. PubMed ID: 12772272
    [Abstract] [Full Text] [Related]

  • 19. Proteomics-grade de novo sequencing approach.
    Savitski MM, Nielsen ML, Kjeldsen F, Zubarev RA.
    J Proteome Res; 2005 Oct 15; 4(6):2348-54. PubMed ID: 16335984
    [Abstract] [Full Text] [Related]

  • 20. Toward high-throughput and reliable peptide identification via MS/MS spectra.
    Liu J.
    Methods Mol Biol; 2008 Oct 15; 484():333-44. PubMed ID: 18592190
    [Abstract] [Full Text] [Related]

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