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Journal Abstract Search

254 related items for PubMed ID: 16287115

  • 1. Molecular surface generation using a variable-radius solvent probe.
    Bhat S, Purisima EO.
    Proteins; 2006 Jan 01; 62(1):244-61. PubMed ID: 16287115
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  • 2. A set of van der Waals and coulombic radii of protein atoms for molecular and solvent-accessible surface calculation, packing evaluation, and docking.
    Li AJ, Nussinov R.
    Proteins; 1998 Jul 01; 32(1):111-27. PubMed ID: 9672047
    [Abstract] [Full Text] [Related]

  • 3. The hydration of globular proteins as derived from volume and compressibility measurements: cross correlating thermodynamic and structural data.
    Chalikian TV, Totrov M, Abagyan R, Breslauer KJ.
    J Mol Biol; 1996 Jul 26; 260(4):588-603. PubMed ID: 8759322
    [Abstract] [Full Text] [Related]

  • 4. Carbohydrate-binding proteins: Dissecting ligand structures through solvent environment occupancy.
    Gauto DF, Di Lella S, Guardia CM, Estrin DA, Martí MA.
    J Phys Chem B; 2009 Jun 25; 113(25):8717-24. PubMed ID: 19485380
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  • 5. Analysis of solvent structure in proteins using neutron D2O-H2O solvent maps: pattern of primary and secondary hydration of trypsin.
    Kossiakoff AA, Sintchak MD, Shpungin J, Presta LG.
    Proteins; 1992 Mar 25; 12(3):223-36. PubMed ID: 1557350
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  • 6. Crucial importance of translational entropy of water in pressure denaturation of proteins.
    Harano Y, Kinoshita M.
    J Chem Phys; 2006 Jul 14; 125(2):24910. PubMed ID: 16848614
    [Abstract] [Full Text] [Related]

  • 7. The volume of atoms on the protein surface: calculated from simulation, using Voronoi polyhedra.
    Gerstein M, Tsai J, Levitt M.
    J Mol Biol; 1995 Jun 23; 249(5):955-66. PubMed ID: 7540695
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  • 9. A molecular dynamics approach to study the importance of solvent in protein interactions.
    Samsonov S, Teyra J, Pisabarro MT.
    Proteins; 2008 Nov 01; 73(2):515-25. PubMed ID: 18452208
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  • 11. Efficient molecular surface generation using level-set methods.
    Can T, Chen CI, Wang YF.
    J Mol Graph Model; 2006 Dec 01; 25(4):442-54. PubMed ID: 16621636
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  • 14. Amino acid architecture and the distribution of polar atoms on the surfaces of proteins.
    Shanahan HP, Thornton JM.
    Biopolymers; 2005 Aug 15; 78(6):318-28. PubMed ID: 15898105
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  • 15. Importance of individual side chains for the stability of a protein fold: computational alanine scanning of the insulin monomer.
    Zoete V, Meuwly M.
    J Comput Chem; 2006 Nov 30; 27(15):1843-57. PubMed ID: 16981237
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  • 20. The effect of vicinal polar and charged groups on hydrophobic hydration.
    Cheng YK, Rossky PJ.
    Biopolymers; 1999 Dec 30; 50(7):742-50. PubMed ID: 10547529
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