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Journal Abstract Search

324 related items for PubMed ID: 16308355

  • 1. Bioinformatic analysis of exon repetition, exon scrambling and trans-splicing in humans.
    Shao X, Shepelev V, Fedorov A.
    Bioinformatics; 2006 Mar 15; 22(6):692-8. PubMed ID: 16308355
    [Abstract] [Full Text] [Related]

  • 2. Advances in the Exon-Intron Database (EID).
    Shepelev V, Fedorov A.
    Brief Bioinform; 2006 Jun 15; 7(2):178-85. PubMed ID: 16772261
    [Abstract] [Full Text] [Related]

  • 3. RBR: library-less repeat detection for ESTs.
    Malde K, Schneeberger K, Coward E, Jonassen I.
    Bioinformatics; 2006 Sep 15; 22(18):2232-6. PubMed ID: 16837527
    [Abstract] [Full Text] [Related]

  • 4. Complementary intron sequence motifs associated with human exon repetition: a role for intragenic, inter-transcript interactions in gene expression.
    Dixon RJ, Eperon IC, Samani NJ.
    Bioinformatics; 2007 Jan 15; 23(2):150-5. PubMed ID: 17105720
    [Abstract] [Full Text] [Related]

  • 5. Gene structure prediction from consensus spliced alignment of multiple ESTs matching the same genomic locus.
    Brendel V, Xing L, Zhu W.
    Bioinformatics; 2004 May 01; 20(7):1157-69. PubMed ID: 14764557
    [Abstract] [Full Text] [Related]

  • 6. Evidence for the regulation of alternative splicing via complementary DNA sequence repeats.
    Lian Y, Garner HR.
    Bioinformatics; 2005 Apr 15; 21(8):1358-64. PubMed ID: 15673565
    [Abstract] [Full Text] [Related]

  • 7. [Analysis, identification and correction of some errors of model refseqs appeared in NCBI Human Gene Database by in silico cloning and experimental verification of novel human genes].
    Zhang DL, Ji L, Li YD.
    Yi Chuan Xue Bao; 2004 May 15; 31(5):431-43. PubMed ID: 15478601
    [Abstract] [Full Text] [Related]

  • 8. ESTMAP: a system for expressed sequence tags mapping on genomic sequences.
    Milanesi L, Rogozin IB.
    IEEE Trans Nanobioscience; 2003 Jun 15; 2(2):75-8. PubMed ID: 15382662
    [Abstract] [Full Text] [Related]

  • 9. WindowMasker: window-based masker for sequenced genomes.
    Morgulis A, Gertz EM, Schäffer AA, Agarwala R.
    Bioinformatics; 2006 Jan 15; 22(2):134-41. PubMed ID: 16287941
    [Abstract] [Full Text] [Related]

  • 10. GeneHub-GEPIS: digital expression profiling for normal and cancer tissues based on an integrated gene database.
    Zhang Y, Luoh SM, Hon LS, Baertsch R, Wood WI, Zhang Z.
    Nucleic Acids Res; 2007 Jul 15; 35(Web Server issue):W152-8. PubMed ID: 17545196
    [Abstract] [Full Text] [Related]

  • 11. cDNA2Genome: a tool for mapping and annotating cDNAs.
    Del Val C, Glatting KH, Suhai S.
    BMC Bioinformatics; 2003 Sep 10; 4():39. PubMed ID: 12964951
    [Abstract] [Full Text] [Related]

  • 12. FELINES: a utility for extracting and examining EST-defined introns and exons.
    Drabenstot SD, Kupfer DM, White JD, Dyer DW, Roe BA, Buchanan KL, Murphy JW.
    Nucleic Acids Res; 2003 Nov 15; 31(22):e141. PubMed ID: 14602934
    [Abstract] [Full Text] [Related]

  • 13. Genome wide identification and classification of alternative splicing based on EST data.
    Gupta S, Zink D, Korn B, Vingron M, Haas SA.
    Bioinformatics; 2004 Nov 01; 20(16):2579-85. PubMed ID: 15117759
    [Abstract] [Full Text] [Related]

  • 14. Fast and sensitive algorithm for aligning ESTs to human genome.
    Ogasawara J, Morishita S.
    Proc IEEE Comput Soc Bioinform Conf; 2002 Nov 01; 1():43-53. PubMed ID: 15838122
    [Abstract] [Full Text] [Related]

  • 15. MGAlignIt: A web service for the alignment of mRNA/EST and genomic sequences.
    Lee BT, Tan TW, Ranganathan S.
    Nucleic Acids Res; 2003 Jul 01; 31(13):3533-6. PubMed ID: 12824360
    [Abstract] [Full Text] [Related]

  • 16. Identification and evolutionary analysis of novel exons and alternative splicing events using cross-species EST-to-genome comparisons in human, mouse and rat.
    Chen FC, Chen CJ, Ho JY, Chuang TJ.
    BMC Bioinformatics; 2006 Mar 15; 7():136. PubMed ID: 16536879
    [Abstract] [Full Text] [Related]

  • 17. A fast and sensitive algorithm for aligning ESTs to the human genome.
    Ogasawara J, Morishita S.
    J Bioinform Comput Biol; 2003 Jul 15; 1(2):363-86. PubMed ID: 15303288
    [Abstract] [Full Text] [Related]

  • 18. Gene structure prediction and alternative splicing analysis using genomically aligned ESTs.
    Kan Z, Rouchka EC, Gish WR, States DJ.
    Genome Res; 2001 May 15; 11(5):889-900. PubMed ID: 11337482
    [Abstract] [Full Text] [Related]

  • 19. SNP mining porcine ESTs with MAVIANT, a novel tool for SNP evaluation and annotation.
    Panitz F, Stengaard H, Hornshøj H, Gorodkin J, Hedegaard J, Cirera S, Thomsen B, Madsen LB, Høj A, Vingborg RK, Zahn B, Wang X, Wang X, Wernersson R, Jørgensen CB, Scheibye-Knudsen K, Arvin T, Lumholdt S, Sawera M, Green T, Nielsen BJ, Havgaard JH, Brunak S, Fredholm M, Bendixen C.
    Bioinformatics; 2007 Jul 01; 23(13):i387-91. PubMed ID: 17646321
    [Abstract] [Full Text] [Related]

  • 20. Spliced leader RNA-mediated trans-splicing in phylum Rotifera.
    Pouchkina-Stantcheva NN, Tunnacliffe A.
    Mol Biol Evol; 2005 Jun 01; 22(6):1482-9. PubMed ID: 15788744
    [Abstract] [Full Text] [Related]

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