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277 related items for PubMed ID: 16377777

  • 1. Solution structure of psi32-modified anticodon stem-loop of Escherichia coli tRNAPhe.
    Cabello-Villegas J, Nikonowicz EP.
    Nucleic Acids Res; 2005; 33(22):6961-71. PubMed ID: 16377777
    [Abstract] [Full Text] [Related]

  • 2. Base pairing within the psi32,psi39-modified anticodon arm of Escherichia coli tRNA(Phe).
    Tworowska I, Nikonowicz EP.
    J Am Chem Soc; 2006 Dec 13; 128(49):15570-1. PubMed ID: 17147349
    [Abstract] [Full Text] [Related]

  • 3. Metal ion stabilization of the U-turn of the A37 N6-dimethylallyl-modified anticodon stem-loop of Escherichia coli tRNAPhe.
    Cabello-Villegas J, Tworowska I, Nikonowicz EP.
    Biochemistry; 2004 Jan 13; 43(1):55-66. PubMed ID: 14705931
    [Abstract] [Full Text] [Related]

  • 4. Solution conformations of unmodified and A(37)N(6)-dimethylallyl modified anticodon stem-loops of Escherichia coli tRNA(Phe).
    Cabello-Villegas J, Winkler ME, Nikonowicz EP.
    J Mol Biol; 2002 Jun 21; 319(5):1015-34. PubMed ID: 12079344
    [Abstract] [Full Text] [Related]

  • 5. Stabilization of the anticodon stem-loop of tRNALys,3 by an A+-C base-pair and by pseudouridine.
    Durant PC, Davis DR.
    J Mol Biol; 1999 Jan 08; 285(1):115-31. PubMed ID: 9878393
    [Abstract] [Full Text] [Related]

  • 6. Structural effects of hypermodified nucleosides in the Escherichia coli and human tRNALys anticodon loop: the effect of nucleosides s2U, mcm5U, mcm5s2U, mnm5s2U, t6A, and ms2t6A.
    Durant PC, Bajji AC, Sundaram M, Kumar RK, Davis DR.
    Biochemistry; 2005 Jun 07; 44(22):8078-89. PubMed ID: 15924427
    [Abstract] [Full Text] [Related]

  • 7. Posttranscriptional modifications at the 37th position in the anticodon stem-loop of tRNA: structural insights from MD simulations.
    Seelam Prabhakar P, Takyi NA, Wetmore SD.
    RNA; 2021 Feb 07; 27(2):202-220. PubMed ID: 33214333
    [Abstract] [Full Text] [Related]

  • 8. Synthetase recognition determinants of E. coli valine transfer RNA.
    Horowitz J, Chu WC, Derrick WB, Liu JC, Liu M, Yue D.
    Biochemistry; 1999 Jun 15; 38(24):7737-46. PubMed ID: 10387013
    [Abstract] [Full Text] [Related]

  • 9. A distinctive RNA fold: the solution structure of an analogue of the yeast tRNAPhe T Psi C domain.
    Koshlap KM, Guenther R, Sochacka E, Malkiewicz A, Agris PF.
    Biochemistry; 1999 Jul 06; 38(27):8647-56. PubMed ID: 10393540
    [Abstract] [Full Text] [Related]

  • 10. The effect of pseudouridine and pH on the structure and dynamics of the anticodon stem-loop of tRNA(Lys,3).
    Durant PC, Davis DR.
    Nucleic Acids Symp Ser; 1997 Jul 06; (36):56-7. PubMed ID: 9478205
    [Abstract] [Full Text] [Related]

  • 11. Escherichia coli dimethylallyl diphosphate:tRNA dimethylallyltransferase: essential elements for recognition of tRNA substrates within the anticodon stem-loop.
    Soderberg T, Poulter CD.
    Biochemistry; 2000 May 30; 39(21):6546-53. PubMed ID: 10828971
    [Abstract] [Full Text] [Related]

  • 12. Transfer RNA recognition by the Escherichia coli delta2-isopentenyl-pyrophosphate:tRNA delta2-isopentenyl transferase: dependence on the anticodon arm structure.
    Motorin Y, Bec G, Tewari R, Grosjean H.
    RNA; 1997 Jul 30; 3(7):721-33. PubMed ID: 9214656
    [Abstract] [Full Text] [Related]

  • 13. Identification of 2'-hydroxyl groups required for interaction of a tRNA anticodon stem-loop region with the ribosome.
    von Ahsen U, Green R, Schroeder R, Noller HF.
    RNA; 1997 Jan 30; 3(1):49-56. PubMed ID: 8990398
    [Abstract] [Full Text] [Related]

  • 14. Analysis of sequence dependent variations in secondary and tertiary structure of tRNA molecules.
    Bhattacharyya D, Bansal M.
    J Biomol Struct Dyn; 1994 Jun 30; 11(6):1251-75. PubMed ID: 7946073
    [Abstract] [Full Text] [Related]

  • 15. The naturally occurring N6-threonyl adenine in anticodon loop of Schizosaccharomyces pombe tRNAi causes formation of a unique U-turn motif.
    Lescrinier E, Nauwelaerts K, Zanier K, Poesen K, Sattler M, Herdewijn P.
    Nucleic Acids Res; 2006 Jun 30; 34(10):2878-86. PubMed ID: 16738127
    [Abstract] [Full Text] [Related]

  • 16. Functional anticodon architecture of human tRNALys3 includes disruption of intraloop hydrogen bonding by the naturally occurring amino acid modification, t6A.
    Stuart JW, Gdaniec Z, Guenther R, Marszalek M, Sochacka E, Malkiewicz A, Agris PF.
    Biochemistry; 2000 Nov 07; 39(44):13396-404. PubMed ID: 11063577
    [Abstract] [Full Text] [Related]

  • 17. Modifications modulate anticodon loop dynamics and codon recognition of E. coli tRNA(Arg1,2).
    Cantara WA, Bilbille Y, Kim J, Kaiser R, Leszczyńska G, Malkiewicz A, Agris PF.
    J Mol Biol; 2012 Mar 02; 416(4):579-97. PubMed ID: 22240457
    [Abstract] [Full Text] [Related]

  • 18. The crystal structure of unmodified tRNAPhe from Escherichia coli.
    Byrne RT, Konevega AL, Rodnina MV, Antson AA.
    Nucleic Acids Res; 2010 Jul 02; 38(12):4154-62. PubMed ID: 20203084
    [Abstract] [Full Text] [Related]

  • 19. A magnesium-induced conformational transition in the loop of a DNA analog of the yeast tRNA(Phe) anticodon is dependent on RNA-like modifications of the bases of the stem.
    Guenther RH, Hardin CC, Sierzputowska-Gracz H, Dao V, Agris PF.
    Biochemistry; 1992 Nov 17; 31(45):11004-11. PubMed ID: 1445838
    [Abstract] [Full Text] [Related]

  • 20. Conformation effects of base modification on the anticodon stem-loop of Bacillus subtilis tRNA(Tyr).
    Denmon AP, Wang J, Nikonowicz EP.
    J Mol Biol; 2011 Sep 16; 412(2):285-303. PubMed ID: 21782828
    [Abstract] [Full Text] [Related]

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