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Journal Abstract Search

117 related items for PubMed ID: 1638260

  • 1. Poisson, compound Poisson and process approximations for testing statistical significance in sequence comparisons.
    Goldstein L, Waterman MS.
    Bull Math Biol; 1992 Sep; 54(5):785-812. PubMed ID: 1638260
    [Abstract] [Full Text] [Related]

  • 2. Asymptotic behaviour and optimal word size for exact and approximate word matches between random sequences.
    Forêt S, Kantorovitz MR, Burden CJ.
    BMC Bioinformatics; 2006 Dec 18; 7 Suppl 5(Suppl 5):S21. PubMed ID: 17254306
    [Abstract] [Full Text] [Related]

  • 3. Matching among multiple random sequences.
    Naus JI, Sheng KN.
    Bull Math Biol; 1997 May 18; 59(3):483-96. PubMed ID: 9172825
    [Abstract] [Full Text] [Related]

  • 4. Characterizing the D2 statistic: word matches in biological sequences.
    Forêt S, Wilson SR, Burden CJ.
    Stat Appl Genet Mol Biol; 2009 May 18; 8():Article 43. PubMed ID: 19883369
    [Abstract] [Full Text] [Related]

  • 5. Robust E-values for gapped local alignments.
    Metzler D.
    J Comput Biol; 2006 May 18; 13(4):882-96. PubMed ID: 16761917
    [Abstract] [Full Text] [Related]

  • 6. On the length of the longest exact position match in a random sequence.
    Reinert G, Waterman MS.
    IEEE/ACM Trans Comput Biol Bioinform; 2007 May 18; 4(1):153-6. PubMed ID: 17277422
    [Abstract] [Full Text] [Related]

  • 7. Compound Poisson and Poisson process approximations for occurrences of multiple words in Markov chains.
    Reinert G, Schbath S.
    J Comput Biol; 1998 May 18; 5(2):223-53. PubMed ID: 9672830
    [Abstract] [Full Text] [Related]

  • 8. New Approximate Statistical Significance of Gapped Alignments Based on the Greedy Extension Model.
    Karami A, Fayyaz Movaghar A, Mercier S, Ferre L.
    J Comput Biol; 2020 Sep 18; 27(9):1361-1372. PubMed ID: 31913652
    [Abstract] [Full Text] [Related]

  • 9. Comparison study on k-word statistical measures for protein: from sequence to 'sequence space'.
    Dai Q, Wang T.
    BMC Bioinformatics; 2008 Sep 23; 9():394. PubMed ID: 18811946
    [Abstract] [Full Text] [Related]

  • 10. Estimating statistical significance of sequence alignments.
    Waterman M.
    Philos Trans R Soc Lond B Biol Sci; 1994 Jun 29; 344(1310):383-90. PubMed ID: 7800708
    [Abstract] [Full Text] [Related]

  • 11. Distributional regimes for the number of k-word matches between two random sequences.
    Lippert RA, Huang H, Waterman MS.
    Proc Natl Acad Sci U S A; 2002 Oct 29; 99(22):13980-9. PubMed ID: 12374863
    [Abstract] [Full Text] [Related]

  • 12. The distribution of word matches between Markovian sequences with periodic boundary conditions.
    Burden CJ, Leopardi P, Forêt S.
    J Comput Biol; 2014 Jan 29; 21(1):41-63. PubMed ID: 24160839
    [Abstract] [Full Text] [Related]

  • 13. A RAPID algorithm for sequence database comparisons: application to the identification of vector contamination in the EMBL databases.
    Miller C, Gurd J, Brass A.
    Bioinformatics; 1999 Feb 29; 15(2):111-21. PubMed ID: 10089196
    [Abstract] [Full Text] [Related]

  • 14. Dynamic programming algorithms for biological sequence comparison.
    Pearson WR, Miller W.
    Methods Enzymol; 1992 Feb 29; 210():575-601. PubMed ID: 1584052
    [Abstract] [Full Text] [Related]

  • 15. Making sense of score statistics for sequence alignments.
    Pagni M, Jongeneel CV.
    Brief Bioinform; 2001 Mar 29; 2(1):51-67. PubMed ID: 11465063
    [Abstract] [Full Text] [Related]

  • 16. Introduction of a distance cut-off into structural alignment by the double dynamic programming algorithm.
    Toh H.
    Comput Appl Biosci; 1997 Aug 29; 13(4):387-96. PubMed ID: 9283753
    [Abstract] [Full Text] [Related]

  • 17. Some useful statistical properties of position-weight matrices.
    Claverie JM.
    Comput Chem; 1994 Sep 29; 18(3):287-94. PubMed ID: 7952899
    [Abstract] [Full Text] [Related]

  • 18. Comprehensive study on iterative algorithms of multiple sequence alignment.
    Hirosawa M, Totoki Y, Hoshida M, Ishikawa M.
    Comput Appl Biosci; 1995 Feb 29; 11(1):13-8. PubMed ID: 7796270
    [Abstract] [Full Text] [Related]

  • 19. Maximum-likelihood estimation of the statistical distribution of Smith-Waterman local sequence similarity scores.
    Mott R.
    Bull Math Biol; 1992 Jan 29; 54(1):59-75. PubMed ID: 25665661
    [Abstract] [Full Text] [Related]

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