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Journal Abstract Search

277 related items for PubMed ID: 16406070

  • 1. The solution structure of the native K50 Bicoid homeodomain bound to the consensus TAATCC DNA-binding site.
    Baird-Titus JM, Clark-Baldwin K, Dave V, Caperelli CA, Ma J, Rance M.
    J Mol Biol; 2006 Mar 10; 356(5):1137-51. PubMed ID: 16406070
    [Abstract] [Full Text] [Related]

  • 2. Reprogrammable recognition codes in bicoid homeodomain-DNA interaction.
    Dave V, Zhao C, Yang F, Tung CS, Ma J.
    Mol Cell Biol; 2000 Oct 10; 20(20):7673-84. PubMed ID: 11003663
    [Abstract] [Full Text] [Related]

  • 3. Solution structure of the K50 class homeodomain PITX2 bound to DNA and implications for mutations that cause Rieger syndrome.
    Chaney BA, Clark-Baldwin K, Dave V, Ma J, Rance M.
    Biochemistry; 2005 May 24; 44(20):7497-511. PubMed ID: 15895993
    [Abstract] [Full Text] [Related]

  • 4. A feed-forward relay integrates the regulatory activities of Bicoid and Orthodenticle via sequential binding to suboptimal sites.
    Datta RR, Ling J, Kurland J, Ren X, Xu Z, Yucel G, Moore J, Shokri L, Baker I, Bishop T, Struffi P, Levina R, Bulyk ML, Johnston RJ, Small S.
    Genes Dev; 2018 May 01; 32(9-10):723-736. PubMed ID: 29764918
    [Abstract] [Full Text] [Related]

  • 5. Isolation of mutations that disrupt cooperative DNA binding by the Drosophila bicoid protein.
    Burz DS, Hanes SD.
    J Mol Biol; 2001 Jan 12; 305(2):219-30. PubMed ID: 11124901
    [Abstract] [Full Text] [Related]

  • 6. The activity of the Drosophila morphogenetic protein Bicoid is inhibited by a domain located outside its homeodomain.
    Zhao C, York A, Yang F, Forsthoefel DJ, Dave V, Fu D, Zhang D, Corado MS, Small S, Seeger MA, Ma J.
    Development; 2002 Apr 12; 129(7):1669-80. PubMed ID: 11923203
    [Abstract] [Full Text] [Related]

  • 7. Interchange of DNA-binding modes in the deformed and ultrabithorax homeodomains: a structural role for the N-terminal arm.
    Frazee RW, Taylor JA, Tullius TD.
    J Mol Biol; 2002 Nov 01; 323(4):665-83. PubMed ID: 12419257
    [Abstract] [Full Text] [Related]

  • 8. Sequence interval within the PEST motif of Bicoid is important for translational repression of caudal mRNA in the anterior region of the Drosophila embryo.
    Niessing D, Dostatni N, Jäckle H, Rivera-Pomar R.
    EMBO J; 1999 Apr 01; 18(7):1966-73. PubMed ID: 10202159
    [Abstract] [Full Text] [Related]

  • 9. Target selectivity of bicoid is dependent on nonconsensus site recognition and protein-protein interaction.
    Zhao C, Dave V, Yang F, Scarborough T, Ma J.
    Mol Cell Biol; 2000 Nov 01; 20(21):8112-23. PubMed ID: 11027281
    [Abstract] [Full Text] [Related]

  • 10. Recognition of multiple patterns of DNA sites by Drosophila homeodomain protein Bicoid.
    Yuan D, Ma X, Ma J.
    J Biochem; 1999 Apr 01; 125(4):809-17. PubMed ID: 10101296
    [Abstract] [Full Text] [Related]

  • 11. Impacts of the ubiquitous factor Zelda on Bicoid-dependent DNA binding and transcription in Drosophila.
    Xu Z, Chen H, Ling J, Yu D, Struffi P, Small S.
    Genes Dev; 2014 Mar 15; 28(6):608-21. PubMed ID: 24637116
    [Abstract] [Full Text] [Related]

  • 12. Lysine Side-Chain Dynamics in the Binding Site of Homeodomain/DNA Complexes As Observed by NMR Relaxation Experiments and Molecular Dynamics Simulations.
    Baird-Titus JM, Thapa M, Doerdelmann T, Combs KA, Rance M.
    Biochemistry; 2018 May 15; 57(19):2796-2813. PubMed ID: 29664630
    [Abstract] [Full Text] [Related]

  • 13. Aromatic amino acids are critical for stability of the bicoid homeodomain.
    Subramaniam V, Jovin TM, Rivera-Pomar RV.
    J Biol Chem; 2001 Jun 15; 276(24):21506-11. PubMed ID: 11294843
    [Abstract] [Full Text] [Related]

  • 14. Homeodomain position 54 specifies transcriptional versus translational control by Bicoid.
    Niessing D, Driever W, Sprenger F, Taubert H, Jäckle H, Rivera-Pomar R.
    Mol Cell; 2000 Feb 15; 5(2):395-401. PubMed ID: 10882080
    [Abstract] [Full Text] [Related]

  • 15. Interplay between positive and negative activities that influence the role of Bicoid in transcription.
    Fu D, Ma J.
    Nucleic Acids Res; 2005 Feb 15; 33(13):3985-93. PubMed ID: 16030350
    [Abstract] [Full Text] [Related]

  • 16. Insights into nonspecific binding of homeodomains from a structure of MATalpha2 bound to DNA.
    Aishima J, Wolberger C.
    Proteins; 2003 Jun 01; 51(4):544-51. PubMed ID: 12784213
    [Abstract] [Full Text] [Related]

  • 17. Enhancer sequences influence the role of the amino-terminal domain of bicoid in transcription.
    Fu D, Zhao C, Ma J.
    Mol Cell Biol; 2003 Jul 01; 23(13):4439-48. PubMed ID: 12808087
    [Abstract] [Full Text] [Related]

  • 18. Bicoid functions without its TATA-binding protein-associated factor interaction domains.
    Schaeffer V, Janody F, Loss C, Desplan C, Wimmer EA.
    Proc Natl Acad Sci U S A; 1999 Apr 13; 96(8):4461-6. PubMed ID: 10200284
    [Abstract] [Full Text] [Related]

  • 19. Drosophila Bicoid is a substrate of sumoylation and its activator function is subject to inhibition by this post-translational modification.
    Liu J, Ma J.
    FEBS Lett; 2012 Jun 12; 586(12):1719-23. PubMed ID: 22584054
    [Abstract] [Full Text] [Related]

  • 20. Intramolecular control of transcriptional activity by the NK2-specific domain in NK-2 homeodomain proteins.
    Watada H, Mirmira RG, Kalamaras J, German MS.
    Proc Natl Acad Sci U S A; 2000 Aug 15; 97(17):9443-8. PubMed ID: 10944215
    [Abstract] [Full Text] [Related]

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