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Journal Abstract Search

184 related items for PubMed ID: 16456885

  • 1. SPLASH: systematic proteomics laboratory analysis and storage hub.
    Lo SL, You T, Lin Q, Joshi SB, Chung MC, Hew CL.
    Proteomics; 2006 Mar; 6(6):1758-69. PubMed ID: 16456885
    [Abstract] [Full Text] [Related]

  • 2. The proteios software environment: an extensible multiuser platform for management and analysis of proteomics data.
    Häkkinen J, Vincic G, Månsson O, Wårell K, Levander F.
    J Proteome Res; 2009 Jun; 8(6):3037-43. PubMed ID: 19354269
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  • 3. CEBS object model for systems biology data, SysBio-OM.
    Xirasagar S, Gustafson S, Merrick BA, Tomer KB, Stasiewicz S, Chan DD, Yost KJ, Yates JR, Sumner S, Xiao N, Waters MD.
    Bioinformatics; 2004 Sep 01; 20(13):2004-15. PubMed ID: 15044233
    [Abstract] [Full Text] [Related]

  • 4. Construction of a nasopharyngeal carcinoma 2D/MS repository with Open Source XML database--Xindice.
    Li F, Li M, Xiao Z, Zhang P, Li J, Chen Z.
    BMC Bioinformatics; 2006 Jan 11; 7():13. PubMed ID: 16403238
    [Abstract] [Full Text] [Related]

  • 5. TOPP--the OpenMS proteomics pipeline.
    Kohlbacher O, Reinert K, Gröpl C, Lange E, Pfeifer N, Schulz-Trieglaff O, Sturm M.
    Bioinformatics; 2007 Jan 15; 23(2):e191-7. PubMed ID: 17237091
    [Abstract] [Full Text] [Related]

  • 6. Information management for proteomics: a perspective.
    Wilkins MR, Arthur JW, Junius FK, Harrison MJ, Traini MD, Bizannes P, Doggett PE, McDonald W.
    Expert Rev Proteomics; 2008 Oct 15; 5(5):663-78. PubMed ID: 18937557
    [Abstract] [Full Text] [Related]

  • 7. The HUPO proteomics standards initiative--easing communication and minimizing data loss in a changing world.
    Orchard S, Hermjakob H.
    Brief Bioinform; 2008 Mar 15; 9(2):166-73. PubMed ID: 18065433
    [Abstract] [Full Text] [Related]

  • 8. PROMPT: a protein mapping and comparison tool.
    Schmidt T, Frishman D.
    BMC Bioinformatics; 2006 Jul 04; 7():331. PubMed ID: 16817977
    [Abstract] [Full Text] [Related]

  • 9. GeneTools--application for functional annotation and statistical hypothesis testing.
    Beisvag V, Jünge FK, Bergum H, Jølsum L, Lydersen S, Günther CC, Ramampiaro H, Langaas M, Sandvik AK, Laegreid A.
    BMC Bioinformatics; 2006 Oct 24; 7():470. PubMed ID: 17062145
    [Abstract] [Full Text] [Related]

  • 10. MIMAS: an innovative tool for network-based high density oligonucleotide microarray data management and annotation.
    Hermida L, Schaad O, Demougin P, Descombes P, Primig M.
    BMC Bioinformatics; 2006 Apr 05; 7():190. PubMed ID: 16597336
    [Abstract] [Full Text] [Related]

  • 11. Using Laboratory Information Management Systems as central part of a proteomics data workflow.
    Stephan C, Kohl M, Turewicz M, Podwojski K, Meyer HE, Eisenacher M.
    Proteomics; 2010 Mar 05; 10(6):1230-49. PubMed ID: 20077413
    [Abstract] [Full Text] [Related]

  • 12. PROTEOMER: A workflow-optimized laboratory information management system for 2-D electrophoresis-centered proteomics.
    Nebrich G, Herrmann M, Hartl D, Diedrich M, Kreitler T, Wierling C, Klose J, Giavalisco P, Zabel C, Mao L.
    Proteomics; 2009 Apr 05; 9(7):1795-808. PubMed ID: 19259999
    [Abstract] [Full Text] [Related]

  • 13. The PRIDE proteomics identifications database: data submission, query, and dataset comparison.
    Jones P, Côté R.
    Methods Mol Biol; 2008 Apr 05; 484():287-303. PubMed ID: 18592187
    [Abstract] [Full Text] [Related]

  • 14. Tools and strategies for visualization of large image data sets in high-resolution imaging mass spectrometry.
    Klinkert I, McDonnell LA, Luxembourg SL, Altelaar AF, Amstalden ER, Piersma SR, Heeren RM.
    Rev Sci Instrum; 2007 May 05; 78(5):053716. PubMed ID: 17552834
    [Abstract] [Full Text] [Related]

  • 15. PROTICdb: a web-based application to store, track, query, and compare plant proteome data.
    Ferry-Dumazet H, Houel G, Montalent P, Moreau L, Langella O, Negroni L, Vincent D, Lalanne C, de Daruvar A, Plomion C, Zivy M, Joets J.
    Proteomics; 2005 May 05; 5(8):2069-81. PubMed ID: 15846840
    [Abstract] [Full Text] [Related]

  • 16. Do we want our data raw? Including binary mass spectrometry data in public proteomics data repositories.
    Martens L, Nesvizhskii AI, Hermjakob H, Adamski M, Omenn GS, Vandekerckhove J, Gevaert K.
    Proteomics; 2005 Aug 05; 5(13):3501-5. PubMed ID: 16041670
    [Abstract] [Full Text] [Related]

  • 17. A database system for the analysis of biochemical pathways.
    Rojas I, Bernardi L, Ratsch E, Kania R, Wittig U, Saric J.
    In Silico Biol; 2002 Aug 05; 2(2):75-86. PubMed ID: 12066842
    [Abstract] [Full Text] [Related]

  • 18. MeltDB: a software platform for the analysis and integration of metabolomics experiment data.
    Neuweger H, Albaum SP, Dondrup M, Persicke M, Watt T, Niehaus K, Stoye J, Goesmann A.
    Bioinformatics; 2008 Dec 01; 24(23):2726-32. PubMed ID: 18765459
    [Abstract] [Full Text] [Related]

  • 19. A Grid-based solution for management and analysis of microarrays in distributed experiments.
    Porro I, Torterolo L, Corradi L, Fato M, Papadimitropoulos A, Scaglione S, Schenone A, Viti F.
    BMC Bioinformatics; 2007 Mar 08; 8 Suppl 1(Suppl 1):S7. PubMed ID: 17430574
    [Abstract] [Full Text] [Related]

  • 20. Rintact: enabling computational analysis of molecular interaction data from the IntAct repository.
    Chiang T, Li N, Orchard S, Kerrien S, Hermjakob H, Gentleman R, Huber W.
    Bioinformatics; 2008 Apr 15; 24(8):1100-1. PubMed ID: 17989096
    [Abstract] [Full Text] [Related]

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