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Journal Abstract Search
470 related items for PubMed ID: 16543278
1. WebCell: a web-based environment for kinetic modeling and dynamic simulation of cellular networks. Lee DY, Yun C, Cho A, Hou BK, Park S, Lee SY. Bioinformatics; 2006 May 01; 22(9):1150-1. PubMed ID: 16543278 [Abstract] [Full Text] [Related]
2. PATIKAweb: a Web interface for analyzing biological pathways through advanced querying and visualization. Dogrusoz U, Erson EZ, Giral E, Demir E, Babur O, Cetintas A, Colak R. Bioinformatics; 2006 Feb 01; 22(3):374-5. PubMed ID: 16287939 [Abstract] [Full Text] [Related]
3. BioNetBuilder: automatic integration of biological networks. Avila-Campillo I, Drew K, Lin J, Reiss DJ, Bonneau R. Bioinformatics; 2007 Feb 01; 23(3):392-3. PubMed ID: 17138585 [Abstract] [Full Text] [Related]
5. BIOCHAM: an environment for modeling biological systems and formalizing experimental knowledge. Calzone L, Fages F, Soliman S. Bioinformatics; 2006 Jul 15; 22(14):1805-7. PubMed ID: 16672256 [Abstract] [Full Text] [Related]
6. BiNoM: a Cytoscape plugin for manipulating and analyzing biological networks. Zinovyev A, Viara E, Calzone L, Barillot E. Bioinformatics; 2008 Mar 15; 24(6):876-7. PubMed ID: 18024474 [Abstract] [Full Text] [Related]
7. BioSilico: an integrated metabolic database system. Hou BK, Kim JS, Jun JH, Lee DY, Kim YW, Chae S, Roh M, In YH, Lee SY. Bioinformatics; 2004 Nov 22; 20(17):3270-2. PubMed ID: 15201189 [Abstract] [Full Text] [Related]
8. VitaPad: visualization tools for the analysis of pathway data. Holford M, Li N, Nadkarni P, Zhao H. Bioinformatics; 2005 Apr 15; 21(8):1596-602. PubMed ID: 15564306 [Abstract] [Full Text] [Related]
9. A model diagram layout extension for SBML. Gauges R, Rost U, Sahle S, Wegner K. Bioinformatics; 2006 Aug 01; 22(15):1879-85. PubMed ID: 16709586 [Abstract] [Full Text] [Related]
10. NetMatch: a Cytoscape plugin for searching biological networks. Ferro A, Giugno R, Pigola G, Pulvirenti A, Skripin D, Bader GD, Shasha D. Bioinformatics; 2007 Apr 01; 23(7):910-2. PubMed ID: 17277332 [Abstract] [Full Text] [Related]
11. The tYNA platform for comparative interactomics: a web tool for managing, comparing and mining multiple networks. Yip KY, Yu H, Kim PM, Schultz M, Gerstein M. Bioinformatics; 2006 Dec 01; 22(23):2968-70. PubMed ID: 17021160 [Abstract] [Full Text] [Related]
12. CellFrame: a data structure for abstraction of cell biology experiments and construction of perturbation networks. Gong Y, Zhang Z. Ann N Y Acad Sci; 2007 Dec 01; 1115():249-66. PubMed ID: 17925354 [Abstract] [Full Text] [Related]
13. MFAML: a standard data structure for representing and exchanging metabolic flux models. Yun H, Lee DY, Jeong J, Lee S, Lee SY. Bioinformatics; 2005 Aug 01; 21(15):3329-30. PubMed ID: 15905275 [Abstract] [Full Text] [Related]
14. A query language for biological networks. Leser U. Bioinformatics; 2005 Sep 01; 21 Suppl 2():ii33-9. PubMed ID: 16204121 [Abstract] [Full Text] [Related]
17. Challenges to be faced in the reconstruction of metabolic networks from public databases. Poolman MG, Bonde BK, Gevorgyan A, Patel HH, Fell DA. Syst Biol (Stevenage); 2006 Sep 01; 153(5):379-84. PubMed ID: 16986322 [Abstract] [Full Text] [Related]
18. jSquid: a Java applet for graphical on-line network exploration. Klammer M, Roopra S, Sonnhammer EL. Bioinformatics; 2008 Jun 15; 24(12):1467-8. PubMed ID: 18445606 [Abstract] [Full Text] [Related]
19. SEBINI: Software Environment for BIological Network Inference. Taylor RC, Shah A, Treatman C, Blevins M. Bioinformatics; 2006 Nov 01; 22(21):2706-8. PubMed ID: 16954144 [Abstract] [Full Text] [Related]