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Journal Abstract Search

212 related items for PubMed ID: 16597231

  • 1. Efficient algorithms for detecting signaling pathways in protein interaction networks.
    Scott J, Ideker T, Karp RM, Sharan R.
    J Comput Biol; 2006 Mar; 13(2):133-44. PubMed ID: 16597231
    [Abstract] [Full Text] [Related]

  • 2. Towards an integrated protein-protein interaction network: a relational Markov network approach.
    Jaimovich A, Elidan G, Margalit H, Friedman N.
    J Comput Biol; 2006 Mar; 13(2):145-64. PubMed ID: 16597232
    [Abstract] [Full Text] [Related]

  • 3. Detecting functional modules in the yeast protein-protein interaction network.
    Chen J, Yuan B.
    Bioinformatics; 2006 Sep 15; 22(18):2283-90. PubMed ID: 16837529
    [Abstract] [Full Text] [Related]

  • 4. Understanding signaling in yeast: Insights from network analysis.
    Arga KY, Onsan ZI, Kirdar B, Ulgen KO, Nielsen J.
    Biotechnol Bioeng; 2007 Aug 01; 97(5):1246-58. PubMed ID: 17252576
    [Abstract] [Full Text] [Related]

  • 5. Integrated analysis of multiple data sources reveals modular structure of biological networks.
    Lu H, Shi B, Wu G, Zhang Y, Zhu X, Zhang Z, Liu C, Zhao Y, Wu T, Wang J, Chen R.
    Biochem Biophys Res Commun; 2006 Jun 23; 345(1):302-9. PubMed ID: 16690033
    [Abstract] [Full Text] [Related]

  • 6. Modeling interactome: scale-free or geometric?
    Przulj N, Corneil DG, Jurisica I.
    Bioinformatics; 2004 Dec 12; 20(18):3508-15. PubMed ID: 15284103
    [Abstract] [Full Text] [Related]

  • 7. Pairwise alignment of protein interaction networks.
    Koyutürk M, Kim Y, Topkara U, Subramaniam S, Szpankowski W, Grama A.
    J Comput Biol; 2006 Mar 12; 13(2):182-99. PubMed ID: 16597234
    [Abstract] [Full Text] [Related]

  • 8. Characterization of degree frequency distribution in protein interaction networks.
    Romano SA, Eguia MC.
    Phys Rev E Stat Nonlin Soft Matter Phys; 2005 Mar 12; 71(3 Pt 1):031901. PubMed ID: 15903453
    [Abstract] [Full Text] [Related]

  • 9. Quantitative inference of dynamic regulatory pathways via microarray data.
    Chang WC, Li CW, Chen BS.
    BMC Bioinformatics; 2005 Mar 07; 6():44. PubMed ID: 15748298
    [Abstract] [Full Text] [Related]

  • 10. Functional topology in a network of protein interactions.
    Przulj N, Wigle DA, Jurisica I.
    Bioinformatics; 2004 Feb 12; 20(3):340-8. PubMed ID: 14960460
    [Abstract] [Full Text] [Related]

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  • 12. Fitting a geometric graph to a protein-protein interaction network.
    Higham DJ, Rasajski M, Przulj N.
    Bioinformatics; 2008 Apr 15; 24(8):1093-9. PubMed ID: 18344248
    [Abstract] [Full Text] [Related]

  • 13. An efficient algorithm for detecting frequent subgraphs in biological networks.
    Koyutürk M, Grama A, Szpankowski W.
    Bioinformatics; 2004 Aug 04; 20 Suppl 1():i200-7. PubMed ID: 15262800
    [Abstract] [Full Text] [Related]

  • 14. Development and implementation of an algorithm for detection of protein complexes in large interaction networks.
    Altaf-Ul-Amin M, Shinbo Y, Mihara K, Kurokawa K, Kanaya S.
    BMC Bioinformatics; 2006 Apr 14; 7():207. PubMed ID: 16613608
    [Abstract] [Full Text] [Related]

  • 15. Gene duplication and hierarchical modularity in intracellular interaction networks.
    Hallinan J.
    Biosystems; 2004 Apr 14; 74(1-3):51-62. PubMed ID: 15125992
    [Abstract] [Full Text] [Related]

  • 16. CGI: a new approach for prioritizing genes by combining gene expression and protein-protein interaction data.
    Ma X, Lee H, Wang L, Sun F.
    Bioinformatics; 2007 Jan 15; 23(2):215-21. PubMed ID: 17098772
    [Abstract] [Full Text] [Related]

  • 17. Optimally orienting physical networks.
    Silverbush D, Elberfeld M, Sharan R.
    J Comput Biol; 2011 Nov 15; 18(11):1437-48. PubMed ID: 21999286
    [Abstract] [Full Text] [Related]

  • 18. A hybrid clustering algorithm for identifying modules in Protein-Protein Interaction networks.
    Yu L, Gao L, Sun PG.
    Int J Data Min Bioinform; 2010 Nov 15; 4(5):600-15. PubMed ID: 21133044
    [Abstract] [Full Text] [Related]

  • 19. Planning optimal measurements of isotopomer distributions for estimation of metabolic fluxes.
    Rantanen A, Mielikäinen T, Rousu J, Maaheimo H, Ukkonen E.
    Bioinformatics; 2006 May 15; 22(10):1198-206. PubMed ID: 16504982
    [Abstract] [Full Text] [Related]

  • 20. Connectivity and expression in protein networks: proteins in a complex are uniformly expressed.
    Carmi S, Levanon EY, Havlin S, Eisenberg E.
    Phys Rev E Stat Nonlin Soft Matter Phys; 2006 Mar 15; 73(3 Pt 1):031909. PubMed ID: 16605560
    [Abstract] [Full Text] [Related]

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