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Journal Abstract Search

713 related items for PubMed ID: 16687659

  • 1. G-quadruplex formation within the promoter of the KRAS proto-oncogene and its effect on transcription.
    Cogoi S, Xodo LE.
    Nucleic Acids Res; 2006; 34(9):2536-49. PubMed ID: 16687659
    [Abstract] [Full Text] [Related]

  • 2. Facilitation of a structural transition in the polypurine/polypyrimidine tract within the proximal promoter region of the human VEGF gene by the presence of potassium and G-quadruplex-interactive agents.
    Sun D, Guo K, Rusche JJ, Hurley LH.
    Nucleic Acids Res; 2005; 33(18):6070-80. PubMed ID: 16239639
    [Abstract] [Full Text] [Related]

  • 3. Characterization of the G-quadruplexes in the duplex nuclease hypersensitive element of the PDGF-A promoter and modulation of PDGF-A promoter activity by TMPyP4.
    Qin Y, Rezler EM, Gokhale V, Sun D, Hurley LH.
    Nucleic Acids Res; 2007; 35(22):7698-713. PubMed ID: 17984069
    [Abstract] [Full Text] [Related]

  • 4. Structural polymorphism within a regulatory element of the human KRAS promoter: formation of G4-DNA recognized by nuclear proteins.
    Cogoi S, Paramasivam M, Spolaore B, Xodo LE.
    Nucleic Acids Res; 2008 Jun; 36(11):3765-80. PubMed ID: 18490377
    [Abstract] [Full Text] [Related]

  • 5. High-resolution three-dimensional NMR structure of the KRAS proto-oncogene promoter reveals key features of a G-quadruplex involved in transcriptional regulation.
    Kerkour A, Marquevielle J, Ivashchenko S, Yatsunyk LA, Mergny JL, Salgado GF.
    J Biol Chem; 2017 May 12; 292(19):8082-8091. PubMed ID: 28330874
    [Abstract] [Full Text] [Related]

  • 6. Formation of pseudosymmetrical G-quadruplex and i-motif structures in the proximal promoter region of the RET oncogene.
    Guo K, Pourpak A, Beetz-Rogers K, Gokhale V, Sun D, Hurley LH.
    J Am Chem Soc; 2007 Aug 22; 129(33):10220-8. PubMed ID: 17672459
    [Abstract] [Full Text] [Related]

  • 7. Protein hnRNPA1 binds to a critical G-rich element of KRAS and unwinds G-quadruplex structures: implications in transcription.
    Xodo L, Paramasivam M, Membrino A, Cogoi S.
    Nucleic Acids Symp Ser (Oxf); 2008 Aug 22; (52):159-60. PubMed ID: 18776302
    [Abstract] [Full Text] [Related]

  • 8. Protein hnRNP A1 and its derivative Up1 unfold quadruplex DNA in the human KRAS promoter: implications for transcription.
    Paramasivam M, Membrino A, Cogoi S, Fukuda H, Nakagama H, Xodo LE.
    Nucleic Acids Res; 2009 May 22; 37(9):2841-53. PubMed ID: 19282454
    [Abstract] [Full Text] [Related]

  • 9. The KRAS promoter responds to Myc-associated zinc finger and poly(ADP-ribose) polymerase 1 proteins, which recognize a critical quadruplex-forming GA-element.
    Cogoi S, Paramasivam M, Membrino A, Yokoyama KK, Xodo LE.
    J Biol Chem; 2010 Jul 16; 285(29):22003-16. PubMed ID: 20457603
    [Abstract] [Full Text] [Related]

  • 10. Insight into the Complexity of the i-Motif and G-Quadruplex DNA Structures Formed in the KRAS Promoter and Subsequent Drug-Induced Gene Repression.
    Kaiser CE, Van Ert NA, Agrawal P, Chawla R, Yang D, Hurley LH.
    J Am Chem Soc; 2017 Jun 28; 139(25):8522-8536. PubMed ID: 28570076
    [Abstract] [Full Text] [Related]

  • 11. The proximal promoter region of the human vascular endothelial growth factor gene has a G-quadruplex structure that can be targeted by G-quadruplex-interactive agents.
    Sun D, Liu WJ, Guo K, Rusche JJ, Ebbinghaus S, Gokhale V, Hurley LH.
    Mol Cancer Ther; 2008 Apr 28; 7(4):880-9. PubMed ID: 18413801
    [Abstract] [Full Text] [Related]

  • 12. Evidence of the formation of G-quadruplex structures in the promoter region of the human vascular endothelial growth factor gene.
    Sun D, Guo K, Shin YJ.
    Nucleic Acids Res; 2011 Mar 28; 39(4):1256-65. PubMed ID: 20959293
    [Abstract] [Full Text] [Related]

  • 13. An intramolecular G-quadruplex structure with mixed parallel/antiparallel G-strands formed in the human BCL-2 promoter region in solution.
    Dai J, Dexheimer TS, Chen D, Carver M, Ambrus A, Jones RA, Yang D.
    J Am Chem Soc; 2006 Feb 01; 128(4):1096-8. PubMed ID: 16433524
    [Abstract] [Full Text] [Related]

  • 14. Biochemical techniques for the characterization of G-quadruplex structures: EMSA, DMS footprinting, and DNA polymerase stop assay.
    Sun D, Hurley LH.
    Methods Mol Biol; 2010 Feb 01; 608():65-79. PubMed ID: 20012416
    [Abstract] [Full Text] [Related]

  • 15. Solution structure of the biologically relevant G-quadruplex element in the human c-MYC promoter. Implications for G-quadruplex stabilization.
    Ambrus A, Chen D, Dai J, Jones RA, Yang D.
    Biochemistry; 2005 Feb 15; 44(6):2048-58. PubMed ID: 15697230
    [Abstract] [Full Text] [Related]

  • 16. Solution equilibria of cytosine- and guanine-rich sequences near the promoter region of the n-myc gene that contain stable hairpins within lateral loops.
    Benabou S, Ferreira R, Aviñó A, González C, Lyonnais S, Solà M, Eritja R, Jaumot J, Gargallo R.
    Biochim Biophys Acta; 2014 Jan 15; 1840(1):41-52. PubMed ID: 24012973
    [Abstract] [Full Text] [Related]

  • 17. Downregulation of the WT1 gene expression via TMPyP4 stabilization of promoter G-quadruplexes in leukemia cells.
    Zidanloo SG, Hosseinzadeh Colagar A, Ayatollahi H, Raoof JB.
    Tumour Biol; 2016 Jul 15; 37(7):9967-77. PubMed ID: 26815508
    [Abstract] [Full Text] [Related]

  • 18. Selective binding of a bioactive porphyrin-based photosensitizer to the G-quadruplex from the KRAS oncogene promoter.
    Caterino M, D'Aria F, Kustov AV, Belykh DV, Khudyaeva IS, Starseva OM, Berezin DB, Pylina YI, Usacheva T, Amato J, Giancola C.
    Int J Biol Macromol; 2020 Feb 15; 145():244-251. PubMed ID: 31870869
    [Abstract] [Full Text] [Related]

  • 19. Targeting the G-quadruplex-forming region near the P1 promoter in the human BCL-2 gene with the cationic porphyrin TMPyP4 and with the complementary C-rich strand.
    Del Toro M, Bucek P, Aviñó A, Jaumot J, González C, Eritja R, Gargallo R.
    Biochimie; 2009 Jul 15; 91(7):894-902. PubMed ID: 19401211
    [Abstract] [Full Text] [Related]

  • 20. The 3'-end region of the human PDGFR-β core promoter nuclease hypersensitive element forms a mixture of two unique end-insertion G-quadruplexes.
    Onel B, Carver M, Agrawal P, Hurley LH, Yang D.
    Biochim Biophys Acta Gen Subj; 2018 Apr 15; 1862(4):846-854. PubMed ID: 29288770
    [Abstract] [Full Text] [Related]

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