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Pubmed for Handhelds

PUBMED FOR HANDHELDS

Journal Abstract Search

491 related items for PubMed ID: 16709586

  • 1. A model diagram layout extension for SBML.
    Gauges R, Rost U, Sahle S, Wegner K.
    Bioinformatics; 2006 Aug 01; 22(15):1879-85. PubMed ID: 16709586
    [Abstract] [Full Text] [Related]

  • 2. Supporting the SBML layout extension.
    Deckard A, Bergmann FT, Sauro HM.
    Bioinformatics; 2006 Dec 01; 22(23):2966-7. PubMed ID: 17038346
    [Abstract] [Full Text] [Related]

  • 3. VitaPad: visualization tools for the analysis of pathway data.
    Holford M, Li N, Nadkarni P, Zhao H.
    Bioinformatics; 2005 Apr 15; 21(8):1596-602. PubMed ID: 15564306
    [Abstract] [Full Text] [Related]

  • 4. Using process diagrams for the graphical representation of biological networks.
    Kitano H, Funahashi A, Matsuoka Y, Oda K.
    Nat Biotechnol; 2005 Aug 15; 23(8):961-6. PubMed ID: 16082367
    [Abstract] [Full Text] [Related]

  • 5. SBML-PET: a Systems Biology Markup Language-based parameter estimation tool.
    Zi Z, Klipp E.
    Bioinformatics; 2006 Nov 01; 22(21):2704-5. PubMed ID: 16926221
    [Abstract] [Full Text] [Related]

  • 6. Automated manipulation of systems biology models using libSBML within Taverna workflows.
    Li P, Oinn T, Soiland S, Kell DB.
    Bioinformatics; 2008 Jan 15; 24(2):287-9. PubMed ID: 18056069
    [Abstract] [Full Text] [Related]

  • 7. SBMLToolbox: an SBML toolbox for MATLAB users.
    Keating SM, Bornstein BJ, Finney A, Hucka M.
    Bioinformatics; 2006 May 15; 22(10):1275-7. PubMed ID: 16574696
    [Abstract] [Full Text] [Related]

  • 8. Design and implementation of a tool for translating SBML into the biochemical stochastic pi-calculus.
    Eccher C, Priami C.
    Bioinformatics; 2006 Dec 15; 22(24):3075-81. PubMed ID: 17046974
    [Abstract] [Full Text] [Related]

  • 9. PATIKAweb: a Web interface for analyzing biological pathways through advanced querying and visualization.
    Dogrusoz U, Erson EZ, Giral E, Demir E, Babur O, Cetintas A, Colak R.
    Bioinformatics; 2006 Feb 01; 22(3):374-5. PubMed ID: 16287939
    [Abstract] [Full Text] [Related]

  • 10. Supporting SBML as a model exchange format in software applications.
    Keating SM, Le Novère N.
    Methods Mol Biol; 2013 Feb 01; 1021():201-25. PubMed ID: 23715987
    [Abstract] [Full Text] [Related]

  • 11. Resources, standards and tools for systems biology.
    Wierling C, Herwig R, Lehrach H.
    Brief Funct Genomic Proteomic; 2007 Sep 01; 6(3):240-51. PubMed ID: 17942476
    [Abstract] [Full Text] [Related]

  • 12. MathSBML: a package for manipulating SBML-based biological models.
    Shapiro BE, Hucka M, Finney A, Doyle J.
    Bioinformatics; 2004 Nov 01; 20(16):2829-31. PubMed ID: 15087311
    [Abstract] [Full Text] [Related]

  • 13. The Systems Biology Markup Language (SBML) Level 3 Package: Layout, Version 1 Core.
    Gauges R, Rost U, Sahle S, Wengler K, Bergmann FT.
    J Integr Bioinform; 2015 Sep 04; 12(2):267. PubMed ID: 26528565
    [Abstract] [Full Text] [Related]

  • 14. A query language for biological networks.
    Leser U.
    Bioinformatics; 2005 Sep 01; 21 Suppl 2():ii33-9. PubMed ID: 16204121
    [Abstract] [Full Text] [Related]

  • 15. Stochastic simulation GUI for biochemical networks.
    Vallabhajosyula RR, Sauro HM.
    Bioinformatics; 2007 Jul 15; 23(14):1859-61. PubMed ID: 17586553
    [Abstract] [Full Text] [Related]

  • 16. BiNoM: a Cytoscape plugin for manipulating and analyzing biological networks.
    Zinovyev A, Viara E, Calzone L, Barillot E.
    Bioinformatics; 2008 Mar 15; 24(6):876-7. PubMed ID: 18024474
    [Abstract] [Full Text] [Related]

  • 17. Cerebral: visualizing multiple experimental conditions on a graph with biological context.
    Barsky A, Munzner T, Gardy J, Kincaid R.
    IEEE Trans Vis Comput Graph; 2008 Mar 15; 14(6):1253-60. PubMed ID: 18988971
    [Abstract] [Full Text] [Related]

  • 18. WebCell: a web-based environment for kinetic modeling and dynamic simulation of cellular networks.
    Lee DY, Yun C, Cho A, Hou BK, Park S, Lee SY.
    Bioinformatics; 2006 May 01; 22(9):1150-1. PubMed ID: 16543278
    [Abstract] [Full Text] [Related]

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  • 20. JSBML: a flexible Java library for working with SBML.
    Dräger A, Rodriguez N, Dumousseau M, Dörr A, Wrzodek C, Le Novère N, Zell A, Hucka M.
    Bioinformatics; 2011 Aug 01; 27(15):2167-8. PubMed ID: 21697129
    [Abstract] [Full Text] [Related]

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