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378 related items for PubMed ID: 16787780

  • 1. Electrostatic interactions in the denatured state and in the transition state for protein folding: effects of denatured state interactions on the analysis of transition state structure.
    Cho JH, Raleigh DP.
    J Mol Biol; 2006 Jun 23; 359(5):1437-46. PubMed ID: 16787780
    [Abstract] [Full Text] [Related]

  • 2. Mutational analysis demonstrates that specific electrostatic interactions can play a key role in the denatured state ensemble of proteins.
    Cho JH, Raleigh DP.
    J Mol Biol; 2005 Oct 14; 353(1):174-85. PubMed ID: 16165156
    [Abstract] [Full Text] [Related]

  • 3. Thermodynamics and kinetics of non-native interactions in protein folding: a single point mutant significantly stabilizes the N-terminal domain of L9 by modulating non-native interactions in the denatured state.
    Cho JH, Sato S, Raleigh DP.
    J Mol Biol; 2004 May 07; 338(4):827-37. PubMed ID: 15099748
    [Abstract] [Full Text] [Related]

  • 4. pH-dependent interactions and the stability and folding kinetics of the N-terminal domain of L9. Electrostatic interactions are only weakly formed in the transition state for folding.
    Luisi DL, Raleigh DP.
    J Mol Biol; 2000 Jun 16; 299(4):1091-100. PubMed ID: 10843860
    [Abstract] [Full Text] [Related]

  • 5. pKa values and the pH dependent stability of the N-terminal domain of L9 as probes of electrostatic interactions in the denatured state. Differentiation between local and nonlocal interactions.
    Kuhlman B, Luisi DL, Young P, Raleigh DP.
    Biochemistry; 1999 Apr 13; 38(15):4896-903. PubMed ID: 10200179
    [Abstract] [Full Text] [Related]

  • 6. Analysis of the pH-dependent folding and stability of histidine point mutants allows characterization of the denatured state and transition state for protein folding.
    Horng JC, Cho JH, Raleigh DP.
    J Mol Biol; 2005 Jan 07; 345(1):163-73. PubMed ID: 15567419
    [Abstract] [Full Text] [Related]

  • 7. Analysis of electrostatic interactions in the denatured state ensemble of the N-terminal domain of L9 under native conditions.
    Meng W, Raleigh DP.
    Proteins; 2011 Dec 07; 79(12):3500-10. PubMed ID: 21915914
    [Abstract] [Full Text] [Related]

  • 8. pH-dependent stability and folding kinetics of a protein with an unusual alpha-beta topology: the C-terminal domain of the ribosomal protein L9.
    Sato S, Raleigh DP.
    J Mol Biol; 2002 Apr 26; 318(2):571-82. PubMed ID: 12051860
    [Abstract] [Full Text] [Related]

  • 9. Mutational analysis of the folding transition state of the C-terminal domain of ribosomal protein L9: a protein with an unusual beta-sheet topology.
    Li Y, Gupta R, Cho JH, Raleigh DP.
    Biochemistry; 2007 Jan 30; 46(4):1013-21. PubMed ID: 17240985
    [Abstract] [Full Text] [Related]

  • 10. The unfolded state of NTL9 is compact in the absence of denaturant.
    Anil B, Li Y, Cho JH, Raleigh DP.
    Biochemistry; 2006 Aug 22; 45(33):10110-6. PubMed ID: 16906769
    [Abstract] [Full Text] [Related]

  • 11. Conformational plasticity in folding of the split beta-alpha-beta protein S6: evidence for burst-phase disruption of the native state.
    Otzen DE, Oliveberg M.
    J Mol Biol; 2002 Apr 05; 317(4):613-27. PubMed ID: 11955013
    [Abstract] [Full Text] [Related]

  • 12. Kinetic isotope effects reveal the presence of significant secondary structure in the transition state for the folding of the N-terminal domain of L9.
    Sato S, Raleigh DP.
    J Mol Biol; 2007 Jul 06; 370(2):349-55. PubMed ID: 17512540
    [Abstract] [Full Text] [Related]

  • 13. Kinetic analysis of molecular dynamics simulations reveals changes in the denatured state and switch of folding pathways upon single-point mutation of a beta-sheet miniprotein.
    Muff S, Caflisch A.
    Proteins; 2008 Mar 06; 70(4):1185-95. PubMed ID: 17847092
    [Abstract] [Full Text] [Related]

  • 14. Nonnative electrostatic interactions can modulate protein folding: molecular dynamics with a grain of salt.
    Azia A, Levy Y.
    J Mol Biol; 2009 Oct 23; 393(2):527-42. PubMed ID: 19683007
    [Abstract] [Full Text] [Related]

  • 15. Fine structure analysis of a protein folding transition state; distinguishing between hydrophobic stabilization and specific packing.
    Anil B, Sato S, Cho JH, Raleigh DP.
    J Mol Biol; 2005 Dec 02; 354(3):693-705. PubMed ID: 16246369
    [Abstract] [Full Text] [Related]

  • 16. The structure of the transition state for folding of chymotrypsin inhibitor 2 analysed by protein engineering methods: evidence for a nucleation-condensation mechanism for protein folding.
    Itzhaki LS, Otzen DE, Fersht AR.
    J Mol Biol; 1995 Nov 24; 254(2):260-88. PubMed ID: 7490748
    [Abstract] [Full Text] [Related]

  • 17. Effects of heme on the structure of the denatured state and folding kinetics of cytochrome b562.
    Garcia P, Bruix M, Rico M, Ciofi-Baffoni S, Banci L, Ramachandra Shastry MC, Roder H, de Lumley Woodyear T, Johnson CM, Fersht AR, Barker PD.
    J Mol Biol; 2005 Feb 11; 346(1):331-44. PubMed ID: 15663948
    [Abstract] [Full Text] [Related]

  • 18. Perturbations of the denatured state ensemble: modeling their effects on protein stability and folding kinetics.
    Wrabl JO, Shortle D.
    Protein Sci; 1996 Nov 11; 5(11):2343-52. PubMed ID: 8931153
    [Abstract] [Full Text] [Related]

  • 19. Similarities between the spectrin SH3 domain denatured state and its folding transition state.
    Kortemme T, Kelly MJ, Kay LE, Forman-Kay J, Serrano L.
    J Mol Biol; 2000 Apr 14; 297(5):1217-29. PubMed ID: 10764585
    [Abstract] [Full Text] [Related]

  • 20. Titration properties and thermodynamics of the transition state for folding: comparison of two-state and multi-state folding pathways.
    Tan YJ, Oliveberg M, Fersht AR.
    J Mol Biol; 1996 Nov 29; 264(2):377-89. PubMed ID: 8951383
    [Abstract] [Full Text] [Related]

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