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Journal Abstract Search

151 related items for PubMed ID: 16805109

  • 1. Adaptive Brownian dynamics simulation for estimating potential mean force in ion channel permeation.
    Krishnamurthy V, Chung SH.
    IEEE Trans Nanobioscience; 2006 Jun; 5(2):126-38. PubMed ID: 16805109
    [Abstract] [Full Text] [Related]

  • 2. Ion permeation through a narrow channel: using gramicidin to ascertain all-atom molecular dynamics potential of mean force methodology and biomolecular force fields.
    Allen TW, Andersen OS, Roux B.
    Biophys J; 2006 May 15; 90(10):3447-68. PubMed ID: 16500984
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  • 3. Brownian dynamics simulation for modeling ion permeation across bionanotubes.
    Krishnamurthy V, Chung SH.
    IEEE Trans Nanobioscience; 2005 Mar 15; 4(1):102-11. PubMed ID: 15816176
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  • 4. The role of the dielectric barrier in narrow biological channels: a novel composite approach to modeling single-channel currents.
    Mamonov AB, Coalson RD, Nitzan A, Kurnikova MG.
    Biophys J; 2003 Jun 15; 84(6):3646-61. PubMed ID: 12770873
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  • 6. Poisson-Nernst-Planck theory approach to the calculation of current through biological ion channels.
    Coalson RD, Kurnikova MG.
    IEEE Trans Nanobioscience; 2005 Mar 15; 4(1):81-93. PubMed ID: 15816174
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  • 9. Semi-Markov models for brownian dynamics permeation in biological ion channels.
    Krishnamurthy V, Luk KY.
    IEEE/ACM Trans Comput Biol Bioinform; 2011 Mar 15; 8(1):273-81. PubMed ID: 21071815
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  • 10. Ion fluxes through nanopores and transmembrane channels.
    Bordin JR, Diehl A, Barbosa MC, Levin Y.
    Phys Rev E Stat Nonlin Soft Matter Phys; 2012 Mar 15; 85(3 Pt 1):031914. PubMed ID: 22587130
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  • 11. Continuum electrostatics fails to describe ion permeation in the gramicidin channel.
    Edwards S, Corry B, Kuyucak S, Chung SH.
    Biophys J; 2002 Sep 15; 83(3):1348-60. PubMed ID: 12202360
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  • 12. The gramicidin ion channel: a model membrane protein.
    Kelkar DA, Chattopadhyay A.
    Biochim Biophys Acta; 2007 Sep 15; 1768(9):2011-25. PubMed ID: 17572379
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  • 15. A parallel finite element simulator for ion transport through three-dimensional ion channel systems.
    Tu B, Chen M, Xie Y, Zhang L, Eisenberg B, Lu B.
    J Comput Chem; 2013 Sep 15; 34(24):2065-78. PubMed ID: 23740647
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  • 17. Energetics of K+ permeability through Gramicidin A by forward-reverse steered molecular dynamics.
    De Fabritiis G, Coveney PV, Villà-Freixa J.
    Proteins; 2008 Oct 15; 73(1):185-94. PubMed ID: 18412256
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  • 19. Role of protein flexibility in ion permeation: a case study in gramicidin A.
    Baştuğ T, Gray-Weale A, Patra SM, Kuyucak S.
    Biophys J; 2006 Apr 01; 90(7):2285-96. PubMed ID: 16415054
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