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Journal Abstract Search

287 related items for PubMed ID: 16823376

  • 21. Evaluation of the similarity of gene expression data estimated with SAGE and Affymetrix GeneChips.
    van Ruissen F, Ruijter JM, Schaaf GJ, Asgharnegad L, Zwijnenburg DA, Kool M, Baas F.
    BMC Genomics; 2005 Jun 14; 6():91. PubMed ID: 15955238
    [Abstract] [Full Text] [Related]

  • 22. Assessment and integration of publicly available SAGE, cDNA microarray, and oligonucleotide microarray expression data for global coexpression analyses.
    Griffith OL, Pleasance ED, Fulton DL, Oveisi M, Ester M, Siddiqui AS, Jones SJ.
    Genomics; 2005 Oct 14; 86(4):476-88. PubMed ID: 16098712
    [Abstract] [Full Text] [Related]

  • 23. Transcript-level annotation of Affymetrix probesets improves the interpretation of gene expression data.
    Yu H, Wang F, Tu K, Xie L, Li YY, Li YX.
    BMC Bioinformatics; 2007 Jun 11; 8():194. PubMed ID: 17559689
    [Abstract] [Full Text] [Related]

  • 24. Multiple-laboratory comparison of microarray platforms.
    Irizarry RA, Warren D, Spencer F, Kim IF, Biswal S, Frank BC, Gabrielson E, Garcia JG, Geoghegan J, Germino G, Griffin C, Hilmer SC, Hoffman E, Jedlicka AE, Kawasaki E, Martínez-Murillo F, Morsberger L, Lee H, Petersen D, Quackenbush J, Scott A, Wilson M, Yang Y, Ye SQ, Yu W.
    Nat Methods; 2005 May 11; 2(5):345-50. PubMed ID: 15846361
    [Abstract] [Full Text] [Related]

  • 25. Microarray RNA transcriptional profiling: part I. Platforms, experimental design and standardization.
    Ahmed FE.
    Expert Rev Mol Diagn; 2006 Jul 11; 6(4):535-50. PubMed ID: 16824028
    [Abstract] [Full Text] [Related]

  • 26. Improving reliability and performance of DNA microarrays.
    Sievertzon M, Nilsson P, Lundeberg J.
    Expert Rev Mol Diagn; 2006 May 11; 6(3):481-92. PubMed ID: 16706748
    [Abstract] [Full Text] [Related]

  • 27. Quality assessment of the Affymetrix U133A&B probesets by target sequence mapping and expression data analysis.
    Orlov YL, Zhou J, Lipovich L, Shahab A, Kuznetsov VA.
    In Silico Biol; 2007 May 11; 7(3):241-60. PubMed ID: 18415975
    [Abstract] [Full Text] [Related]

  • 28. Performance comparison of one-color and two-color platforms within the MicroArray Quality Control (MAQC) project.
    Patterson TA, Lobenhofer EK, Fulmer-Smentek SB, Collins PJ, Chu TM, Bao W, Fang H, Kawasaki ES, Hager J, Tikhonova IR, Walker SJ, Zhang L, Hurban P, de Longueville F, Fuscoe JC, Tong W, Shi L, Wolfinger RD.
    Nat Biotechnol; 2006 Sep 11; 24(9):1140-50. PubMed ID: 16964228
    [Abstract] [Full Text] [Related]

  • 29. Assessing statistical precision, power, and robustness of alternative experimental designs for two color microarray platforms based on mixed effects models.
    Tempelman RJ.
    Vet Immunol Immunopathol; 2005 May 15; 105(3-4):175-86. PubMed ID: 15808299
    [Abstract] [Full Text] [Related]

  • 30. Microarray data analysis for differential expression: a tutorial.
    Suárez E, Burguete A, Mclachlan GJ.
    P R Health Sci J; 2009 Jun 15; 28(2):89-104. PubMed ID: 19530550
    [Abstract] [Full Text] [Related]

  • 31. Assessing the conservation of mammalian gene expression using high-density exon arrays.
    Xing Y, Ouyang Z, Kapur K, Scott MP, Wong WH.
    Mol Biol Evol; 2007 Jun 15; 24(6):1283-5. PubMed ID: 17387099
    [Abstract] [Full Text] [Related]

  • 32. Comparison of smoking-induced gene expression on Affymetrix Exon and 3'-based expression arrays.
    Zhang X, Liu G, Lenburg ME, Spira A.
    Genome Inform; 2007 Jun 15; 18():247-57. PubMed ID: 18546492
    [Abstract] [Full Text] [Related]

  • 33. Evaluation of a genomics platform for cross-species transcriptome analysis of recombinant CHO cells.
    Ernst W, Trummer E, Mead J, Bessant C, Strelec H, Katinger H, Hesse F.
    Biotechnol J; 2006 Jun 15; 1(6):639-50. PubMed ID: 16892312
    [Abstract] [Full Text] [Related]

  • 34. Modeling nonlinearity in dilution design microarray data.
    Zheng X, Huang HC, Li W, Liu P, Li QZ, Liu Y.
    Bioinformatics; 2007 Jun 01; 23(11):1339-47. PubMed ID: 17237040
    [Abstract] [Full Text] [Related]

  • 35. Combined array-comparative genomic hybridization and single-nucleotide polymorphism-loss of heterozygosity analysis reveals complex genetic alterations in cervical cancer.
    Kloth JN, Oosting J, van Wezel T, Szuhai K, Knijnenburg J, Gorter A, Kenter GG, Fleuren GJ, Jordanova ES.
    BMC Genomics; 2007 Feb 20; 8():53. PubMed ID: 17311676
    [Abstract] [Full Text] [Related]

  • 36. Expression Profiling Using Affymetrix GeneChip Microarrays.
    Auer H, Newsom DL, Kornacker K.
    Methods Mol Biol; 2009 Feb 20; 509():35-46. PubMed ID: 19212713
    [Abstract] [Full Text] [Related]

  • 37. Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in cancer-associated gene expression measurements.
    Carter SL, Eklund AC, Mecham BH, Kohane IS, Szallasi Z.
    BMC Bioinformatics; 2005 Apr 25; 6():107. PubMed ID: 15850491
    [Abstract] [Full Text] [Related]

  • 38. Data distribution of short oligonucleotide expression arrays and its application to the construction of a generalized intellectual framework.
    Konishi T.
    Stat Appl Genet Mol Biol; 2008 Apr 25; 7(1):Article25. PubMed ID: 18764774
    [Abstract] [Full Text] [Related]

  • 39. Allergy-related genes in microarray: an update review.
    Saito H, Abe J, Matsumoto K.
    J Allergy Clin Immunol; 2005 Jul 25; 116(1):56-9. PubMed ID: 15990774
    [Abstract] [Full Text] [Related]

  • 40. Use of external controls in microarray experiments.
    Yang IV.
    Methods Enzymol; 2006 Jul 25; 411():50-63. PubMed ID: 16939785
    [Abstract] [Full Text] [Related]

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