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Journal Abstract Search

286 related items for PubMed ID: 16845039

  • 1. PseudoViewer: web application and web service for visualizing RNA pseudoknots and secondary structures.
    Byun Y, Han K.
    Nucleic Acids Res; 2006 Jul 01; 34(Web Server issue):W416-22. PubMed ID: 16845039
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  • 2. PseudoViewer3: generating planar drawings of large-scale RNA structures with pseudoknots.
    Byun Y, Han K.
    Bioinformatics; 2009 Jun 01; 25(11):1435-7. PubMed ID: 19369500
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  • 3. pknotsRG: RNA pseudoknot folding including near-optimal structures and sliding windows.
    Reeder J, Steffen P, Giegerich R.
    Nucleic Acids Res; 2007 Jul 01; 35(Web Server issue):W320-4. PubMed ID: 17478505
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  • 4. PSEUDOVIEWER2: Visualization of RNA pseudoknots of any type.
    Han K, Byun Y.
    Nucleic Acids Res; 2003 Jul 01; 31(13):3432-40. PubMed ID: 12824341
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  • 11. DIAL: a web server for the pairwise alignment of two RNA three-dimensional structures using nucleotide, dihedral angle and base-pairing similarities.
    Ferrè F, Ponty Y, Lorenz WA, Clote P.
    Nucleic Acids Res; 2007 Jul 01; 35(Web Server issue):W659-68. PubMed ID: 17567620
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  • 12. Kinefold web server for RNA/DNA folding path and structure prediction including pseudoknots and knots.
    Xayaphoummine A, Bucher T, Isambert H.
    Nucleic Acids Res; 2005 Jul 01; 33(Web Server issue):W605-10. PubMed ID: 15980546
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  • 13. Friend, an integrated analytical front-end application for bioinformatics.
    Abyzov A, Errami M, Leslin CM, Ilyin VA.
    Bioinformatics; 2005 Sep 15; 21(18):3677-8. PubMed ID: 16076889
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  • 14. FlexStem: improving predictions of RNA secondary structures with pseudoknots by reducing the search space.
    Chen X, He SM, Bu D, Zhang F, Wang Z, Chen R, Gao W.
    Bioinformatics; 2008 Sep 15; 24(18):1994-2001. PubMed ID: 18586700
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  • 15. RDfolder: a web server for prediction of RNA secondary structure.
    Ying X, Luo H, Luo J, Li W.
    Nucleic Acids Res; 2004 Jul 01; 32(Web Server issue):W150-3. PubMed ID: 15215369
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  • 16. An efficient algorithm for planar drawing of RNA structures with pseudoknots of any type.
    Byun Y, Han K.
    J Bioinform Comput Biol; 2016 Jun 01; 14(3):1650009. PubMed ID: 26932273
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  • 18. RNALOSS: a web server for RNA locally optimal secondary structures.
    Clote P.
    Nucleic Acids Res; 2005 Jul 01; 33(Web Server issue):W600-4. PubMed ID: 15980545
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