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Journal Abstract Search

268 related items for PubMed ID: 16853446

  • 21. Solvation free energy of amino acids and side-chain analogues.
    Chang J, Lenhoff AM, Sandler SI.
    J Phys Chem B; 2007 Mar 01; 111(8):2098-106. PubMed ID: 17269814
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  • 22. Polyproline II helix is the preferred conformation for unfolded polyalanine in water.
    Mezei M, Fleming PJ, Srinivasan R, Rose GD.
    Proteins; 2004 May 15; 55(3):502-7. PubMed ID: 15103614
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  • 23. Sensitivity of polar solvation dynamics to the secondary structures of aqueous proteins and the role of surface exposure of the probe.
    Bandyopadhyay S, Chakraborty S, Balasubramanian S, Bagchi B.
    J Am Chem Soc; 2005 Mar 23; 127(11):4071-5. PubMed ID: 15771544
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  • 24. Conformational studies on model peptides with 1-aminocyclobutane 1-carboxylic acid residues.
    Balaji VN, Ramnarayan K, Chan MF, Rao SN.
    Pept Res; 1995 Mar 23; 8(3):178-86. PubMed ID: 7670233
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  • 25. Translocation of amino acyl residues from the membrane interface to the hydrophobic core: thermodynamic model and experimental analysis using ATR-FTIR spectroscopy.
    Aisenbrey C, Goormaghtigh E, Ruysschaert JM, Bechinger B.
    Mol Membr Biol; 2006 Mar 23; 23(4):363-74. PubMed ID: 16923729
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  • 31. Linear response theory: an alternative to PB and GB methods for the analysis of molecular dynamics trajectories?
    Morreale A, de la Cruz X, Meyer T, Gelpí JL, Luque FJ, Orozco M.
    Proteins; 2004 Nov 15; 57(3):458-67. PubMed ID: 15382247
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  • 32. In silico prediction of drug solubility. 3. Free energy of solvation in pure amorphous matter.
    Lüder K, Lindfors L, Westergren J, Nordholm S, Kjellander R.
    J Phys Chem B; 2007 Jun 28; 111(25):7303-11. PubMed ID: 17550285
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  • 33. The effect of aqueous solvation upon alpha-helix formation for polyalanines.
    Salvador P, Asensio A, Dannenberg JJ.
    J Phys Chem B; 2007 Jun 28; 111(25):7462-6. PubMed ID: 17552560
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  • 35. Conformational equilibrium in alanine-rich peptides probed by reversible stretching simulations.
    Hénin J, Schulten K, Chipot C.
    J Phys Chem B; 2006 Aug 24; 110(33):16718-23. PubMed ID: 16913811
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  • 36. Establishing effective simulation protocols for beta- and alpha/beta-peptides. II. Molecular mechanical (MM) model for a cyclic beta-residue.
    Zhu X, Koenig P, Gellman SH, Yethiraj A, Cui Q.
    J Phys Chem B; 2008 May 01; 112(17):5439-48. PubMed ID: 18402479
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  • 38. Absolute free energies of binding of peptide analogs to the HIV-1 protease from molecular dynamics simulations.
    Bartels C, Widmer A, Ehrhardt C.
    J Comput Chem; 2005 Sep 01; 26(12):1294-305. PubMed ID: 15981257
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  • 39. Molecular modeling of conformational properties of oligodepsipeptides.
    Zhang J, King M, Suggs L, Ren P.
    Biomacromolecules; 2007 Oct 01; 8(10):3015-24. PubMed ID: 17877396
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