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Journal Abstract Search

385 related items for PubMed ID: 16870937

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  • 3. MUSA: a parameter free algorithm for the identification of biologically significant motifs.
    Mendes ND, Casimiro AC, Santos PM, Sá-Correia I, Oliveira AL, Freitas AT.
    Bioinformatics; 2006 Dec 15; 22(24):2996-3002. PubMed ID: 17068086
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  • 6. Detection of generic spaced motifs using submotif pattern mining.
    Wijaya E, Rajaraman K, Yiu SM, Sung WK.
    Bioinformatics; 2007 Jun 15; 23(12):1476-85. PubMed ID: 17483509
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  • 7. RankMotif++: a motif-search algorithm that accounts for relative ranks of K-mers in binding transcription factors.
    Chen X, Hughes TR, Morris Q.
    Bioinformatics; 2007 Jul 01; 23(13):i72-9. PubMed ID: 17646348
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  • 8. Simultaneous alignment and annotation of cis-regulatory regions.
    Bais AS, Grossmann S, Vingron M.
    Bioinformatics; 2007 Jan 15; 23(2):e44-9. PubMed ID: 17237103
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  • 9. A Gibbs sampler for identification of symmetrically structured, spaced DNA motifs with improved estimation of the signal length.
    Favorov AV, Gelfand MS, Gerasimova AV, Ravcheev DA, Mironov AA, Makeev VJ.
    Bioinformatics; 2005 May 15; 21(10):2240-5. PubMed ID: 15728117
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  • 11. SPACER: identification of cis-regulatory elements with non-contiguous critical residues.
    Chakravarty A, Carlson JM, Khetani RS, DeZiel CE, Gross RH.
    Bioinformatics; 2007 Apr 15; 23(8):1029-31. PubMed ID: 17470480
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  • 13. A mixture model-based discriminate analysis for identifying ordered transcription factor binding site pairs in gene promoters directly regulated by estrogen receptor-alpha.
    Li L, Cheng AS, Jin VX, Paik HH, Fan M, Li X, Zhang W, Robarge J, Balch C, Davuluri RV, Kim S, Huang TH, Nephew KP.
    Bioinformatics; 2006 Sep 15; 22(18):2210-6. PubMed ID: 16809387
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  • 14. Finding motifs with insufficient number of strong binding sites.
    Leung HC, Chin FY, Yiu SM, Rosenfeld R, Tsang WW.
    J Comput Biol; 2005 Sep 15; 12(6):686-701. PubMed ID: 16108711
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  • 15. Identification of co-regulated genes through Bayesian clustering of predicted regulatory binding sites.
    Qin ZS, McCue LA, Thompson W, Mayerhofer L, Lawrence CE, Liu JS.
    Nat Biotechnol; 2003 Apr 15; 21(4):435-9. PubMed ID: 12627170
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  • 17. Graphical approach to weak motif recognition.
    Yang X, Rajapakse JC.
    Genome Inform; 2004 Apr 15; 15(2):52-62. PubMed ID: 15706491
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  • 18. On counting position weight matrix matches in a sequence, with application to discriminative motif finding.
    Sinha S.
    Bioinformatics; 2006 Jul 15; 22(14):e454-63. PubMed ID: 16873507
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