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Journal Abstract Search

92 related items for PubMed ID: 17044163

  • 1. Bases of motifs for generating repeated patterns with wild cards.
    Pisanti N, Crochemore M, Grossi R, Sagot MF.
    IEEE/ACM Trans Comput Biol Bioinform; 2005; 2(1):40-50. PubMed ID: 17044163
    [Abstract] [Full Text] [Related]

  • 2. Finding exact optimal motifs in matrix representation by partitioning.
    Leung HC, Chin FY.
    Bioinformatics; 2005 Sep 01; 21 Suppl 2():ii86-92. PubMed ID: 16204132
    [Abstract] [Full Text] [Related]

  • 3. Finding motifs from all sequences with and without binding sites.
    Leung HC, Chin FY.
    Bioinformatics; 2006 Sep 15; 22(18):2217-23. PubMed ID: 16870937
    [Abstract] [Full Text] [Related]

  • 4. Voting algorithms for the motif finding problem.
    Liu X, Ma B, Wang L.
    Comput Syst Bioinformatics Conf; 2008 Sep 15; 7():37-47. PubMed ID: 19642267
    [Abstract] [Full Text] [Related]

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  • 6. Finding motifs in the twilight zone.
    Keich U, Pevzner PA.
    Bioinformatics; 2002 Oct 15; 18(10):1374-81. PubMed ID: 12376382
    [Abstract] [Full Text] [Related]

  • 7. Efficiently finding regulatory elements using correlation with gene expression.
    Bannai H, Inenaga S, Shinohara A, Takeda M, Miyano S.
    J Bioinform Comput Biol; 2004 Jun 15; 2(2):273-88. PubMed ID: 15297982
    [Abstract] [Full Text] [Related]

  • 8. Subtle motifs: defining the limits of motif finding algorithms.
    Keich U, Pevzner PA.
    Bioinformatics; 2002 Oct 15; 18(10):1382-90. PubMed ID: 12376383
    [Abstract] [Full Text] [Related]

  • 9. MUSA: a parameter free algorithm for the identification of biologically significant motifs.
    Mendes ND, Casimiro AC, Santos PM, Sá-Correia I, Oliveira AL, Freitas AT.
    Bioinformatics; 2006 Dec 15; 22(24):2996-3002. PubMed ID: 17068086
    [Abstract] [Full Text] [Related]

  • 10. On counting position weight matrix matches in a sequence, with application to discriminative motif finding.
    Sinha S.
    Bioinformatics; 2006 Jul 15; 22(14):e454-63. PubMed ID: 16873507
    [Abstract] [Full Text] [Related]

  • 11. Efficient sequential and parallel algorithms for finding edit distance based motifs.
    Pal S, Xiao P, Rajasekaran S.
    BMC Genomics; 2016 Aug 18; 17 Suppl 4(Suppl 4):465. PubMed ID: 27557423
    [Abstract] [Full Text] [Related]

  • 12. Finding subtle motifs by branching from sample strings.
    Price A, Ramabhadran S, Pevzner PA.
    Bioinformatics; 2003 Oct 18; 19 Suppl 2():ii149-55. PubMed ID: 14534184
    [Abstract] [Full Text] [Related]

  • 13. Detection of generic spaced motifs using submotif pattern mining.
    Wijaya E, Rajaraman K, Yiu SM, Sung WK.
    Bioinformatics; 2007 Jun 15; 23(12):1476-85. PubMed ID: 17483509
    [Abstract] [Full Text] [Related]

  • 14. LOGOS: a modular Bayesian model for de novo motif detection.
    Xing EP, Wu W, Jordan MI, Karp RM.
    Proc IEEE Comput Soc Bioinform Conf; 2003 Jun 15; 2():266-76. PubMed ID: 16452802
    [Abstract] [Full Text] [Related]

  • 15. Tree Gibbs Sampler: identifying conserved motifs without aligning orthologous sequences.
    Cai X, Hu H, Li XS.
    Bioinformatics; 2007 Aug 01; 23(15):2013-4. PubMed ID: 17540681
    [Abstract] [Full Text] [Related]

  • 16. PEAKS: identification of regulatory motifs by their position in DNA sequences.
    Bellora N, Farré D, Mar Albà M.
    Bioinformatics; 2007 Jan 15; 23(2):243-4. PubMed ID: 17098773
    [Abstract] [Full Text] [Related]

  • 17. Improved Exact Enumerative Algorithms for the Planted (l, d)-Motif Search Problem.
    Tanaka S.
    IEEE/ACM Trans Comput Biol Bioinform; 2014 Jan 15; 11(2):361-74. PubMed ID: 26355783
    [Abstract] [Full Text] [Related]

  • 18. Natural similarity measures between position frequency matrices with an application to clustering.
    Pape UJ, Rahmann S, Vingron M.
    Bioinformatics; 2008 Feb 01; 24(3):350-7. PubMed ID: 18174183
    [Abstract] [Full Text] [Related]

  • 19. Discovering sequence motifs.
    Bailey TL.
    Methods Mol Biol; 2008 Feb 01; 452():231-51. PubMed ID: 18566768
    [Abstract] [Full Text] [Related]

  • 20. EMD: an ensemble algorithm for discovering regulatory motifs in DNA sequences.
    Hu J, Yang YD, Kihara D.
    BMC Bioinformatics; 2006 Jul 13; 7():342. PubMed ID: 16839417
    [Abstract] [Full Text] [Related]

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