These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
2. Folding landscapes of the Alzheimer amyloid-beta(12-28) peptide. Baumketner A, Shea JE. J Mol Biol; 2006 Sep 22; 362(3):567-79. PubMed ID: 16930617 [Abstract] [Full Text] [Related]
3. Modeling the alpha-helix to beta-hairpin transition mechanism and the formation of oligomeric aggregates of the fibrillogenic peptide Abeta(12-28): insights from all-atom molecular dynamics simulations. Simona F, Tiana G, Broglia RA, Colombo G. J Mol Graph Model; 2004 Dec 22; 23(3):263-73. PubMed ID: 15530822 [Abstract] [Full Text] [Related]
4. Amyloid beta-peptide oligomerization in silico: dimer and trimer. Jang S, Shin S. J Phys Chem B; 2006 Feb 09; 110(5):1955-8. PubMed ID: 16471767 [Abstract] [Full Text] [Related]
5. Structures and thermodynamics of Alzheimer's amyloid-beta Abeta(16-35) monomer and dimer by replica exchange molecular dynamics simulations: implication for full-length Abeta fibrillation. Chebaro Y, Mousseau N, Derreumaux P. J Phys Chem B; 2009 May 28; 113(21):7668-75. PubMed ID: 19415895 [Abstract] [Full Text] [Related]
6. Structural diversity of dimers of the Alzheimer amyloid-beta(25-35) peptide and polymorphism of the resulting fibrils. Wei G, Jewett AI, Shea JE. Phys Chem Chem Phys; 2010 Apr 14; 12(14):3622-9. PubMed ID: 20336261 [Abstract] [Full Text] [Related]
7. Assembling amyloid fibrils from designed structures containing a significant amyloid beta-peptide fragment. Tjernberg LO, Tjernberg A, Bark N, Shi Y, Ruzsicska BP, Bu Z, Thyberg J, Callaway DJ. Biochem J; 2002 Aug 15; 366(Pt 1):343-51. PubMed ID: 12023906 [Abstract] [Full Text] [Related]
9. Molecular dynamics studies of hexamers of amyloid-beta peptide (16-35) and its mutants: influence of charge states on amyloid formation. Han W, Wu YD. Proteins; 2007 Feb 15; 66(3):575-87. PubMed ID: 17115426 [Abstract] [Full Text] [Related]
10. Computational study on the structural diversity of amyloid Beta Peptide (abeta(10-35)) oligomers. Jang S, Shin S. J Phys Chem B; 2008 Mar 20; 112(11):3479-84. PubMed ID: 18303879 [Abstract] [Full Text] [Related]
11. Contact pair dynamics during folding of two small proteins: chicken villin head piece and the Alzheimer protein beta-amyloid. Mukherjee A, Bagchi B. J Chem Phys; 2004 Jan 15; 120(3):1602-12. PubMed ID: 15268287 [Abstract] [Full Text] [Related]
12. Simulation study on the disordered state of an Alzheimer's beta amyloid peptide Abeta(12 36) in water consisting of random-structural, beta-structural, and helical clusters. Ikebe J, Kamiya N, Ito J, Shindo H, Higo J. Protein Sci; 2007 Aug 15; 16(8):1596-608. PubMed ID: 17656579 [Abstract] [Full Text] [Related]
13. Comparative molecular dynamics studies of wild-type and oxidized forms of full-length Alzheimer amyloid beta-peptides Abeta(1-40) and Abeta(1-42). Triguero L, Singh R, Prabhakar R. J Phys Chem B; 2008 Jun 12; 112(23):7123-31. PubMed ID: 18476733 [Abstract] [Full Text] [Related]
14. Structure of the amyloid-beta (1-42) monomer absorbed to model phospholipid bilayers: a molecular dynamics study. Davis CH, Berkowitz ML. J Phys Chem B; 2009 Oct 29; 113(43):14480-6. PubMed ID: 19807060 [Abstract] [Full Text] [Related]
18. Beta-hairpin folding by a model amyloid peptide in solution and at an interface. Knecht V. J Phys Chem B; 2008 Aug 07; 112(31):9476-83. PubMed ID: 18593146 [Abstract] [Full Text] [Related]