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Journal Abstract Search

227 related items for PubMed ID: 17183719

  • 1. Probe selection and expression index computation of Affymetrix Exon Arrays.
    Xing Y, Kapur K, Wong WH.
    PLoS One; 2006 Dec 20; 1(1):e88. PubMed ID: 17183719
    [Abstract] [Full Text] [Related]

  • 2. Gene expression and isoform variation analysis using Affymetrix Exon Arrays.
    Bemmo A, Benovoy D, Kwan T, Gaffney DJ, Jensen RV, Majewski J.
    BMC Genomics; 2008 Nov 07; 9():529. PubMed ID: 18990248
    [Abstract] [Full Text] [Related]

  • 3. Exon arrays provide accurate assessments of gene expression.
    Kapur K, Xing Y, Ouyang Z, Wong WH.
    Genome Biol; 2007 Nov 07; 8(5):R82. PubMed ID: 17504534
    [Abstract] [Full Text] [Related]

  • 4. Comparison of Affymetrix Gene Array with the Exon Array shows potential application for detection of transcript isoform variation.
    Ha KCh, Coulombe-Huntington J, Majewski J.
    BMC Genomics; 2009 Nov 12; 10():519. PubMed ID: 19909511
    [Abstract] [Full Text] [Related]

  • 5. Probe-level estimation improves the detection of differential splicing in Affymetrix exon array studies.
    Laajala E, Aittokallio T, Lahesmaa R, Elo LL.
    Genome Biol; 2009 Nov 12; 10(7):R77. PubMed ID: 19607685
    [Abstract] [Full Text] [Related]

  • 6. Combining gene expression data from different generations of oligonucleotide arrays.
    Hwang KB, Kong SW, Greenberg SA, Park PJ.
    BMC Bioinformatics; 2004 Oct 25; 5():159. PubMed ID: 15504239
    [Abstract] [Full Text] [Related]

  • 7. Assessing the conservation of mammalian gene expression using high-density exon arrays.
    Xing Y, Ouyang Z, Kapur K, Scott MP, Wong WH.
    Mol Biol Evol; 2007 Jun 25; 24(6):1283-5. PubMed ID: 17387099
    [Abstract] [Full Text] [Related]

  • 8. Improvements to previous algorithms to predict gene structure and isoform concentrations using Affymetrix Exon arrays.
    Anton MA, Aramburu A, Rubio A.
    BMC Bioinformatics; 2010 Nov 26; 11():578. PubMed ID: 21110835
    [Abstract] [Full Text] [Related]

  • 9. Cross-hybridization modeling on Affymetrix exon arrays.
    Kapur K, Jiang H, Xing Y, Wong WH.
    Bioinformatics; 2008 Dec 15; 24(24):2887-93. PubMed ID: 18984598
    [Abstract] [Full Text] [Related]

  • 10. A Brassica exon array for whole-transcript gene expression profiling.
    Love CG, Graham NS, O Lochlainn S, Bowen HC, May ST, White PJ, Broadley MR, Hammond JP, King GJ.
    PLoS One; 2010 Sep 16; 5(9):. PubMed ID: 20862292
    [Abstract] [Full Text] [Related]

  • 11. GATExplorer: genomic and transcriptomic explorer; mapping expression probes to gene loci, transcripts, exons and ncRNAs.
    Risueño A, Fontanillo C, Dinger ME, De Las Rivas J.
    BMC Bioinformatics; 2010 Apr 29; 11():221. PubMed ID: 20429936
    [Abstract] [Full Text] [Related]

  • 12. A statistical method for predicting splice variants between two groups of samples using GeneChip expression array data.
    Fan W, Khalid N, Hallahan AR, Olson JM, Zhao LP.
    Theor Biol Med Model; 2006 Apr 07; 3():19. PubMed ID: 16603076
    [Abstract] [Full Text] [Related]

  • 13. Using high-density exon arrays to profile gene expression in closely related species.
    Lin L, Liu S, Brockway H, Seok J, Jiang P, Wong WH, Xing Y.
    Nucleic Acids Res; 2009 Jul 07; 37(12):e90. PubMed ID: 19474342
    [Abstract] [Full Text] [Related]

  • 14. Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in cancer-associated gene expression measurements.
    Carter SL, Eklund AC, Mecham BH, Kohane IS, Szallasi Z.
    BMC Bioinformatics; 2005 Apr 25; 6():107. PubMed ID: 15850491
    [Abstract] [Full Text] [Related]

  • 15. Methods comparison for high-resolution transcriptional analysis of archival material on Affymetrix Plus 2.0 and Exon 1.0 microarrays.
    Linton K, Hey Y, Dibben S, Miller C, Freemont A, Radford J, Pepper S.
    Biotechniques; 2009 Jul 25; 47(1):587-96. PubMed ID: 19594443
    [Abstract] [Full Text] [Related]

  • 16. Experimental comparison and evaluation of the Affymetrix exon and U133Plus2 GeneChip arrays.
    Abdueva D, Wing MR, Schaub B, Triche TJ.
    PLoS One; 2007 Sep 19; 2(9):e913. PubMed ID: 17878948
    [Abstract] [Full Text] [Related]

  • 17. Comparative evaluation of isoform-level gene expression estimation algorithms for RNA-seq and exon-array platforms.
    Dapas M, Kandpal M, Bi Y, Davuluri RV.
    Brief Bioinform; 2017 Mar 01; 18(2):260-269. PubMed ID: 26944083
    [Abstract] [Full Text] [Related]

  • 18. A verification protocol for the probe sequences of Affymetrix genome arrays reveals high probe accuracy for studies in mouse, human and rat.
    Alberts R, Terpstra P, Hardonk M, Bystrykh LV, de Haan G, Breitling R, Nap JP, Jansen RC.
    BMC Bioinformatics; 2007 Apr 20; 8():132. PubMed ID: 17448222
    [Abstract] [Full Text] [Related]

  • 19. A statistical framework for genome-wide discovery of biomarker splice variations with GeneChip Human Exon 1.0 ST Arrays.
    Yoshida R, Numata K, Imoto S, Nagasaki M, Doi A, Ueno K, Miyano S.
    Genome Inform; 2006 Apr 20; 17(1):88-99. PubMed ID: 17503359
    [Abstract] [Full Text] [Related]

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