These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


Pubmed for Handhelds

PUBMED FOR HANDHELDS

Journal Abstract Search

410 related items for PubMed ID: 17186483

  • 21. DynaDock: A new molecular dynamics-based algorithm for protein-peptide docking including receptor flexibility.
    Antes I.
    Proteins; 2010 Apr; 78(5):1084-104. PubMed ID: 20017216
    [Abstract] [Full Text] [Related]

  • 22. Fragment-Based flexible ligand docking by evolutionary optimization.
    Budin N, Majeux N, Caflisch A.
    Biol Chem; 2001 Sep; 382(9):1365-72. PubMed ID: 11688719
    [Abstract] [Full Text] [Related]

  • 23. Lessons in molecular recognition: the effects of ligand and protein flexibility on molecular docking accuracy.
    Erickson JA, Jalaie M, Robertson DH, Lewis RA, Vieth M.
    J Med Chem; 2004 Jan 01; 47(1):45-55. PubMed ID: 14695819
    [Abstract] [Full Text] [Related]

  • 24. EADock: docking of small molecules into protein active sites with a multiobjective evolutionary optimization.
    Grosdidier A, Zoete V, Michielin O.
    Proteins; 2007 Jun 01; 67(4):1010-25. PubMed ID: 17380512
    [Abstract] [Full Text] [Related]

  • 25. ParaDockS: a framework for molecular docking with population-based metaheuristics.
    Meier R, Pippel M, Brandt F, Sippl W, Baldauf C.
    J Chem Inf Model; 2010 May 24; 50(5):879-89. PubMed ID: 20415499
    [Abstract] [Full Text] [Related]

  • 26. Random drift particle swarm optimisation algorithm for highly flexible protein-ligand docking.
    Fu Y, Chen Z, Sun J.
    J Theor Biol; 2018 Nov 14; 457():180-189. PubMed ID: 30170044
    [Abstract] [Full Text] [Related]

  • 27. An Efficient ABC_DE_Based Hybrid Algorithm for Protein-Ligand Docking.
    Guan B, Zhang C, Zhao Y.
    Int J Mol Sci; 2018 Apr 13; 19(4):. PubMed ID: 29652791
    [Abstract] [Full Text] [Related]

  • 28. Docking ligands into flexible and solvated macromolecules. 3. Impact of input ligand conformation, protein flexibility, and water molecules on the accuracy of docking programs.
    Corbeil CR, Moitessier N.
    J Chem Inf Model; 2009 Apr 13; 49(4):997-1009. PubMed ID: 19391631
    [Abstract] [Full Text] [Related]

  • 29. Entropy-based lamarckian quantum-behaved particle swarm optimization for flexible ligand docking.
    You Q, Li C, Sun J, Palade V, Pan F.
    Mol Inform; 2023 Mar 13; 42(3):e2200080. PubMed ID: 36720014
    [Abstract] [Full Text] [Related]

  • 30. Development and validation of a genetic algorithm for flexible docking.
    Jones G, Willett P, Glen RC, Leach AR, Taylor R.
    J Mol Biol; 1997 Apr 04; 267(3):727-48. PubMed ID: 9126849
    [Abstract] [Full Text] [Related]

  • 31. Surflex: fully automatic flexible molecular docking using a molecular similarity-based search engine.
    Jain AN.
    J Med Chem; 2003 Feb 13; 46(4):499-511. PubMed ID: 12570372
    [Abstract] [Full Text] [Related]

  • 32. Conformational selection of protein kinase A revealed by flexible-ligand flexible-protein docking.
    Huang Z, Wong CF.
    J Comput Chem; 2009 Mar 13; 30(4):631-44. PubMed ID: 18711718
    [Abstract] [Full Text] [Related]

  • 33. Flexible ligand docking: a multistep strategy approach.
    Wang J, Kollman PA, Kuntz ID.
    Proteins; 1999 Jul 01; 36(1):1-19. PubMed ID: 10373002
    [Abstract] [Full Text] [Related]

  • 34. Docking studies of matrix metalloproteinase inhibitors: zinc parameter optimization to improve the binding free energy prediction.
    Hu X, Shelver WH.
    J Mol Graph Model; 2003 Nov 01; 22(2):115-26. PubMed ID: 12932782
    [Abstract] [Full Text] [Related]

  • 35. Development and evaluation of a generic evolutionary method for protein-ligand docking.
    Yang JM.
    J Comput Chem; 2004 Apr 30; 25(6):843-57. PubMed ID: 15011256
    [Abstract] [Full Text] [Related]

  • 36. Rational automatic search method for stable docking models of protein and ligand.
    Mizutani MY, Tomioka N, Itai A.
    J Mol Biol; 1994 Oct 21; 243(2):310-26. PubMed ID: 7932757
    [Abstract] [Full Text] [Related]

  • 37. Fully automated molecular mechanics based induced fit protein-ligand docking method.
    Koska J, Spassov VZ, Maynard AJ, Yan L, Austin N, Flook PK, Venkatachalam CM.
    J Chem Inf Model; 2008 Oct 21; 48(10):1965-73. PubMed ID: 18816046
    [Abstract] [Full Text] [Related]

  • 38. Detailed analysis of grid-based molecular docking: A case study of CDOCKER-A CHARMm-based MD docking algorithm.
    Wu G, Robertson DH, Brooks CL, Vieth M.
    J Comput Chem; 2003 Oct 21; 24(13):1549-62. PubMed ID: 12925999
    [Abstract] [Full Text] [Related]

  • 39. Gaussian docking functions.
    McGann MR, Almond HR, Nicholls A, Grant JA, Brown FK.
    Biopolymers; 2003 Jan 21; 68(1):76-90. PubMed ID: 12579581
    [Abstract] [Full Text] [Related]

  • 40. HIGA: A Running History Information Guided Genetic Algorithm for Protein-Ligand Docking.
    Guan B, Zhang C, Zhao Y.
    Molecules; 2017 Dec 15; 22(12):. PubMed ID: 29244750
    [Abstract] [Full Text] [Related]

    Page: [Previous] [Next] [New Search]
    of 21.