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Journal Abstract Search

320 related items for PubMed ID: 17202159

  • 1.
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  • 3. MPromDb: an integrated resource for annotation and visualization of mammalian gene promoters and ChIP-chip experimental data.
    Sun H, Palaniswamy SK, Pohar TT, Jin VX, Huang TH, Davuluri RV.
    Nucleic Acids Res; 2006 Jan 01; 34(Database issue):D98-103. PubMed ID: 16381984
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  • 4. AGRIS: Arabidopsis gene regulatory information server, an information resource of Arabidopsis cis-regulatory elements and transcription factors.
    Davuluri RV, Sun H, Palaniswamy SK, Matthews N, Molina C, Kurtz M, Grotewold E.
    BMC Bioinformatics; 2003 Jun 23; 4():25. PubMed ID: 12820902
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  • 5. PReMod: a database of genome-wide mammalian cis-regulatory module predictions.
    Ferretti V, Poitras C, Bergeron D, Coulombe B, Robert F, Blanchette M.
    Nucleic Acids Res; 2007 Jan 23; 35(Database issue):D122-6. PubMed ID: 17148480
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  • 6. PlantPAN 2.0: an update of plant promoter analysis navigator for reconstructing transcriptional regulatory networks in plants.
    Chow CN, Zheng HQ, Wu NY, Chien CH, Huang HD, Lee TY, Chiang-Hsieh YF, Hou PF, Yang TY, Chang WC.
    Nucleic Acids Res; 2016 Jan 04; 44(D1):D1154-60. PubMed ID: 26476450
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  • 7. ABS: a database of Annotated regulatory Binding Sites from orthologous promoters.
    Blanco E, Farré D, Albà MM, Messeguer X, Guigó R.
    Nucleic Acids Res; 2006 Jan 01; 34(Database issue):D63-7. PubMed ID: 16381947
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  • 9. AtPAN: an integrated system for reconstructing transcriptional regulatory networks in Arabidopsis thaliana.
    Chen YA, Wen YC, Chang WC.
    BMC Genomics; 2012 Mar 08; 13():85. PubMed ID: 22397531
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  • 10. ITFP: an integrated platform of mammalian transcription factors.
    Zheng G, Tu K, Yang Q, Xiong Y, Wei C, Xie L, Zhu Y, Li Y.
    Bioinformatics; 2008 Oct 15; 24(20):2416-7. PubMed ID: 18713790
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  • 11. KBERG: KnowledgeBase for Estrogen Responsive Genes.
    Tang S, Zhang Z, Tan SL, Tang MH, Kumar AP, Ramadoss SK, Bajic VB.
    Nucleic Acids Res; 2007 Jan 15; 35(Database issue):D732-6. PubMed ID: 17090589
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  • 12. PlantPAN3.0: a new and updated resource for reconstructing transcriptional regulatory networks from ChIP-seq experiments in plants.
    Chow CN, Lee TY, Hung YC, Li GZ, Tseng KC, Liu YH, Kuo PL, Zheng HQ, Chang WC.
    Nucleic Acids Res; 2019 Jan 08; 47(D1):D1155-D1163. PubMed ID: 30395277
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  • 13. Predicting distinct organization of transcription factor binding sites on the promoter regions: a new genome-based approach to expand human embryonic stem cell regulatory network.
    Hosseinpour B, Bakhtiarizadeh MR, Khosravi P, Ebrahimie E.
    Gene; 2013 Dec 01; 531(2):212-9. PubMed ID: 24042128
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  • 14. GRASSIUS: a platform for comparative regulatory genomics across the grasses.
    Yilmaz A, Nishiyama MY, Fuentes BG, Souza GM, Janies D, Gray J, Grotewold E.
    Plant Physiol; 2009 Jan 01; 149(1):171-80. PubMed ID: 18987217
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  • 15. HemoPDB: Hematopoiesis Promoter Database, an information resource of transcriptional regulation in blood cell development.
    Pohar TT, Sun H, Davuluri RV.
    Nucleic Acids Res; 2004 Jan 01; 32(Database issue):D86-90. PubMed ID: 14681365
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  • 16. Bioinformatics tools for modeling transcription factor target genes and epigenetic changes.
    Davuluri RV.
    Methods Mol Biol; 2007 Jan 01; 408():129-51. PubMed ID: 18314581
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  • 17. AGRIS and AtRegNet. a platform to link cis-regulatory elements and transcription factors into regulatory networks.
    Palaniswamy SK, James S, Sun H, Lamb RS, Davuluri RV, Grotewold E.
    Plant Physiol; 2006 Mar 01; 140(3):818-29. PubMed ID: 16524982
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  • 19. ChIP-Array 2: integrating multiple omics data to construct gene regulatory networks.
    Wang P, Qin J, Qin Y, Zhu Y, Wang LY, Li MJ, Zhang MQ, Wang J.
    Nucleic Acids Res; 2015 Jul 01; 43(W1):W264-9. PubMed ID: 25916854
    [Abstract] [Full Text] [Related]

  • 20. From promoter analysis to transcriptional regulatory network prediction using PAINT.
    Gonye GE, Chakravarthula P, Schwaber JS, Vadigepalli R.
    Methods Mol Biol; 2007 Jul 01; 408():49-68. PubMed ID: 18314577
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