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Journal Abstract Search

136 related items for PubMed ID: 17237103

  • 1. Simultaneous alignment and annotation of cis-regulatory regions.
    Bais AS, Grossmann S, Vingron M.
    Bioinformatics; 2007 Jan 15; 23(2):e44-9. PubMed ID: 17237103
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  • 2. Finding motifs from all sequences with and without binding sites.
    Leung HC, Chin FY.
    Bioinformatics; 2006 Sep 15; 22(18):2217-23. PubMed ID: 16870937
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  • 3. MUSA: a parameter free algorithm for the identification of biologically significant motifs.
    Mendes ND, Casimiro AC, Santos PM, Sá-Correia I, Oliveira AL, Freitas AT.
    Bioinformatics; 2006 Dec 15; 22(24):2996-3002. PubMed ID: 17068086
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  • 4. Phylogeny based discovery of regulatory elements.
    Gertz J, Fay JC, Cohen BA.
    BMC Bioinformatics; 2006 May 22; 7():266. PubMed ID: 16716228
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  • 6. CONREAL: conserved regulatory elements anchored alignment algorithm for identification of transcription factor binding sites by phylogenetic footprinting.
    Berezikov E, Guryev V, Plasterk RH, Cuppen E.
    Genome Res; 2004 Jan 22; 14(1):170-8. PubMed ID: 14672977
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  • 10. Natural similarity measures between position frequency matrices with an application to clustering.
    Pape UJ, Rahmann S, Vingron M.
    Bioinformatics; 2008 Feb 01; 24(3):350-7. PubMed ID: 18174183
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  • 11. Context-specific independence mixture modeling for positional weight matrices.
    Georgi B, Schliep A.
    Bioinformatics; 2006 Jul 15; 22(14):e166-73. PubMed ID: 16873468
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  • 12. Informative priors based on transcription factor structural class improve de novo motif discovery.
    Narlikar L, Gordân R, Ohler U, Hartemink AJ.
    Bioinformatics; 2006 Jul 15; 22(14):e384-92. PubMed ID: 16873497
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  • 15. Functional inference from non-random distributions of conserved predicted transcription factor binding sites.
    Dieterich C, Rahmann S, Vingron M.
    Bioinformatics; 2004 Aug 04; 20 Suppl 1():i109-15. PubMed ID: 15262788
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  • 20. TFBS identification based on genetic algorithm with combined representations and adaptive post-processing.
    Chan TM, Leung KS, Lee KH.
    Bioinformatics; 2008 Feb 01; 24(3):341-9. PubMed ID: 18065426
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