These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
2. Computational methods for generating models of denatured and partially folded proteins. Smith LJ. Methods; 2004 Sep; 34(1):144-50. PubMed ID: 15283923 [Abstract] [Full Text] [Related]
3. Structure and disorder in an unfolded state under nondenaturing conditions from ensemble models consistent with a large number of experimental restraints. Marsh JA, Forman-Kay JD. J Mol Biol; 2009 Aug 14; 391(2):359-74. PubMed ID: 19501099 [Abstract] [Full Text] [Related]
4. Comparing atomistic simulation data with the NMR experiment: how much can NOEs actually tell us? Zagrovic B, van Gunsteren WF. Proteins; 2006 Apr 01; 63(1):210-8. PubMed ID: 16425239 [Abstract] [Full Text] [Related]
5. Ensemble modeling of protein disordered states: experimental restraint contributions and validation. Marsh JA, Forman-Kay JD. Proteins; 2012 Feb 01; 80(2):556-72. PubMed ID: 22095648 [Abstract] [Full Text] [Related]
6. NMR characterization of partially folded and unfolded conformational ensembles of proteins. Barbar E. Biopolymers; 1999 Feb 01; 51(3):191-207. PubMed ID: 10516571 [Abstract] [Full Text] [Related]
7. Quantitative description of backbone conformational sampling of unfolded proteins at amino acid resolution from NMR residual dipolar couplings. Nodet G, Salmon L, Ozenne V, Meier S, Jensen MR, Blackledge M. J Am Chem Soc; 2009 Dec 16; 131(49):17908-18. PubMed ID: 19908838 [Abstract] [Full Text] [Related]
8. Improved structural characterizations of the drkN SH3 domain unfolded state suggest a compact ensemble with native-like and non-native structure. Marsh JA, Neale C, Jack FE, Choy WY, Lee AY, Crowhurst KA, Forman-Kay JD. J Mol Biol; 2007 Apr 13; 367(5):1494-510. PubMed ID: 17320108 [Abstract] [Full Text] [Related]
9. Structural analysis of intrinsically disordered proteins by small-angle X-ray scattering. Bernadó P, Svergun DI. Mol Biosyst; 2012 Jan 13; 8(1):151-67. PubMed ID: 21947276 [Abstract] [Full Text] [Related]
10. Distribution of molecular size within an unfolded state ensemble using small-angle X-ray scattering and pulse field gradient NMR techniques. Choy WY, Mulder FA, Crowhurst KA, Muhandiram DR, Millett IS, Doniach S, Forman-Kay JD, Kay LE. J Mol Biol; 2002 Feb 08; 316(1):101-12. PubMed ID: 11829506 [Abstract] [Full Text] [Related]
11. Determination of conformationally heterogeneous states of proteins. Vendruscolo M. Curr Opin Struct Biol; 2007 Feb 08; 17(1):15-20. PubMed ID: 17239581 [Abstract] [Full Text] [Related]
12. Ensemble calculations of unstructured proteins constrained by RDC and PRE data: a case study of urea-denatured ubiquitin. Huang JR, Grzesiek S. J Am Chem Soc; 2010 Jan 20; 132(2):694-705. PubMed ID: 20000836 [Abstract] [Full Text] [Related]
13. Defining conformational ensembles of intrinsically disordered and partially folded proteins directly from chemical shifts. Jensen MR, Salmon L, Nodet G, Blackledge M. J Am Chem Soc; 2010 Feb 03; 132(4):1270-2. PubMed ID: 20063887 [Abstract] [Full Text] [Related]
14. Structural interpretation of paramagnetic relaxation enhancement-derived distances for disordered protein states. Ganguly D, Chen J. J Mol Biol; 2009 Jul 17; 390(3):467-77. PubMed ID: 19447112 [Abstract] [Full Text] [Related]
15. Characterization of long-range structure in the denatured state of staphylococcal nuclease. II. Distance restraints from paramagnetic relaxation and calculation of an ensemble of structures. Gillespie JR, Shortle D. J Mol Biol; 1997 Apr 25; 268(1):170-84. PubMed ID: 9149150 [Abstract] [Full Text] [Related]
16. Molecular simulations of protein disorder. Rauscher S, Pomès R. Biochem Cell Biol; 2010 Apr 25; 88(2):269-90. PubMed ID: 20453929 [Abstract] [Full Text] [Related]
17. Protein structure prediction constrained by solution X-ray scattering data and structural homology identification. Zheng W, Doniach S. J Mol Biol; 2002 Feb 08; 316(1):173-87. PubMed ID: 11829511 [Abstract] [Full Text] [Related]
18. Denaturant-dependent conformational changes in a beta-trefoil protein: global and residue-specific aspects of an equilibrium denaturation process. Latypov RF, Liu D, Jacob J, Harvey TS, Bondarenko PV, Kleemann GR, Brems DN, Raibekas AA. Biochemistry; 2009 Nov 24; 48(46):10934-47. PubMed ID: 19839644 [Abstract] [Full Text] [Related]
19. Protein folding in mode space: a collective coordinate approach to structure prediction. Abseher R, Nilges M. Proteins; 2002 Nov 15; 49(3):365-77. PubMed ID: 12360526 [Abstract] [Full Text] [Related]
20. Influence of multiple well defined conformations on small-angle scattering of proteins in solution. Heller WT. Acta Crystallogr D Biol Crystallogr; 2005 Jan 15; 61(Pt 1):33-44. PubMed ID: 15608373 [Abstract] [Full Text] [Related] Page: [Next] [New Search]