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443 related items for PubMed ID: 17258174

  • 1. Reinvestigating the codon and amino acid usage of S. cerevisiae genome: a new insight from protein secondary structure analysis.
    Kahali B, Basak S, Ghosh TC.
    Biochem Biophys Res Commun; 2007 Mar 16; 354(3):693-9. PubMed ID: 17258174
    [Abstract] [Full Text] [Related]

  • 2. Delving deeper into the unexpected correlation between gene expressivity and codon usage bias of Escherichia coli genome.
    Kahali B, Basak S, Ghosh TC.
    J Biomol Struct Dyn; 2008 Jun 16; 25(6):655-61. PubMed ID: 18399699
    [Abstract] [Full Text] [Related]

  • 3. [Analysis of factors shaping S. pneumoniae codon usage].
    Hou ZC, Yang N.
    Yi Chuan Xue Bao; 2002 Jun 16; 29(8):747-52. PubMed ID: 12200868
    [Abstract] [Full Text] [Related]

  • 4. Studies on the relationships between the synonymous codon usage and protein secondary structural units.
    Gupta SK, Majumdar S, Bhattacharya TK, Ghosh TC.
    Biochem Biophys Res Commun; 2000 Mar 24; 269(3):692-6. PubMed ID: 10720478
    [Abstract] [Full Text] [Related]

  • 5. A role for codon order in translation dynamics.
    Cannarozzi G, Schraudolph NN, Faty M, von Rohr P, Friberg MT, Roth AC, Gonnet P, Gonnet G, Barral Y.
    Cell; 2010 Apr 16; 141(2):355-67. PubMed ID: 20403329
    [Abstract] [Full Text] [Related]

  • 6. Selective constraints in yeast genes with differential expressivity: codon pair usage and mRNA stability perspectives.
    Kahali B, Ahmad S, Ghosh TC.
    Gene; 2011 Aug 01; 481(2):76-82. PubMed ID: 21554930
    [Abstract] [Full Text] [Related]

  • 7. Limitations of codon adaptation index and other coding DNA-based features for prediction of protein expression in Saccharomyces cerevisiae.
    Friberg M, von Rohr P, Gonnet G.
    Yeast; 2004 Oct 15; 21(13):1083-93. PubMed ID: 15484285
    [Abstract] [Full Text] [Related]

  • 8. Codon bias as a factor in regulating expression via translation rate in the human genome.
    Lavner Y, Kotlar D.
    Gene; 2005 Jan 17; 345(1):127-38. PubMed ID: 15716084
    [Abstract] [Full Text] [Related]

  • 9. Coevolution of codon usage and transfer RNA abundance.
    Bulmer M.
    Nature; 2005 Jan 17; 325(6106):728-30. PubMed ID: 2434856
    [Abstract] [Full Text] [Related]

  • 10. Studies on synonymous codon and amino acid usages in Aeromonas hydrophila phage Aeh1: architecture of protein-coding genes and therapeutic implications.
    Sau K.
    J Microbiol Immunol Infect; 2007 Feb 17; 40(1):24-33. PubMed ID: 17332903
    [Abstract] [Full Text] [Related]

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  • 14. Protein secondary structural types are differentially coded on messenger RNA.
    Thanaraj TA, Argos P.
    Protein Sci; 1996 Oct 17; 5(10):1973-83. PubMed ID: 8897597
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  • 15. Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae.
    Percudani R, Pavesi A, Ottonello S.
    J Mol Biol; 1997 May 02; 268(2):322-30. PubMed ID: 9159473
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  • 17. Codon usage bias is correlated with gene expression levels in the fission yeast Schizosaccharomyces pombe.
    Hiraoka Y, Kawamata K, Haraguchi T, Chikashige Y.
    Genes Cells; 2009 Apr 02; 14(4):499-509. PubMed ID: 19335619
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  • 18. The relationship between synonymous codon usage and protein structure in Escherichia coli and Homo sapiens.
    Gu W, Zhou T, Ma J, Sun X, Lu Z.
    Biosystems; 2004 Feb 02; 73(2):89-97. PubMed ID: 15013221
    [Abstract] [Full Text] [Related]

  • 19. Nature of selective constraints on synonymous codon usage of rice differs in GC-poor and GC-rich genes.
    Mukhopadhyay P, Basak S, Ghosh TC.
    Gene; 2007 Oct 01; 400(1-2):71-81. PubMed ID: 17629420
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