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Journal Abstract Search

216 related items for PubMed ID: 17411109

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  • 3. K-leap method for accelerating stochastic simulation of coupled chemical reactions.
    Cai X, Xu Z.
    J Chem Phys; 2007 Feb 21; 126(7):074102. PubMed ID: 17328588
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  • 4. Efficient formulation of the stochastic simulation algorithm for chemically reacting systems.
    Cao Y, Li H, Petzold L.
    J Chem Phys; 2004 Sep 01; 121(9):4059-67. PubMed ID: 15332951
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  • 8. "All possible steps" approach to the accelerated use of Gillespie's algorithm.
    Lipshtat A.
    J Chem Phys; 2007 May 14; 126(18):184103. PubMed ID: 17508788
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  • 9. The sorting direct method for stochastic simulation of biochemical systems with varying reaction execution behavior.
    McCollum JM, Peterson GD, Cox CD, Simpson ML, Samatova NF.
    Comput Biol Chem; 2006 Feb 14; 30(1):39-49. PubMed ID: 16321569
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  • 10. Accelerated stochastic simulation algorithm for coupled chemical reactions with delays.
    Zhou W, Peng X, Yan Z, Wang Y.
    Comput Biol Chem; 2008 Aug 14; 32(4):240-2. PubMed ID: 18467179
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  • 13. Detailed comparison between StochSim and SSA.
    Liu Z, Cao Y.
    IET Syst Biol; 2008 Sep 14; 2(5):334-41. PubMed ID: 19045828
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  • 14. A partial-propensity formulation of the stochastic simulation algorithm for chemical reaction networks with delays.
    Ramaswamy R, Sbalzarini IF.
    J Chem Phys; 2011 Jan 07; 134(1):014106. PubMed ID: 21218996
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  • 15. Entropy production and fluctuation theorem along a stochastic limit cycle.
    Xiao TJ, Hou Z, Xin H.
    J Chem Phys; 2008 Sep 21; 129(11):114506. PubMed ID: 19044968
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  • 16. A new class of highly efficient exact stochastic simulation algorithms for chemical reaction networks.
    Ramaswamy R, González-Segredo N, Sbalzarini IF.
    J Chem Phys; 2009 Jun 28; 130(24):244104. PubMed ID: 19566139
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  • 17. Unbiased tau-leap methods for stochastic simulation of chemically reacting systems.
    Xu Z, Cai X.
    J Chem Phys; 2008 Apr 21; 128(15):154112. PubMed ID: 18433195
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  • 18. Accelerated stochastic simulation of the stiff enzyme-substrate reaction.
    Cao Y, Gillespie DT, Petzold LR.
    J Chem Phys; 2005 Oct 08; 123(14):144917. PubMed ID: 16238434
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  • 19. Stochastic simulations on a model of circadian rhythm generation.
    Miura S, Shimokawa T, Nomura T.
    Biosystems; 2008 Oct 08; 93(1-2):133-40. PubMed ID: 18585851
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  • 20. A modified next reaction method for simulating chemical systems with time dependent propensities and delays.
    Anderson DF.
    J Chem Phys; 2007 Dec 07; 127(21):214107. PubMed ID: 18067349
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